Variant report

Variant	rs74135127
Chromosome Location	chr1:185506120-185506121
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:185498240..185499811-chr1:185504554..185507003,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs58677790	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv548398	chr1:185136458-186003094	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:185494600-185515200	Weak transcription	Left Ventricle	heart
2	chr1:185496200-185506400	Weak transcription	Duodenum Mucosa	Duodenum
3	chr1:185501400-185506400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr1:185501400-185506400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr1:185501600-185506400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr1:185501600-185508400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr1:185501800-185506200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr1:185503000-185506200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr1:185503600-185510200	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr1:185504200-185506400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr1:185504400-185506200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr1:185504400-185506200	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr1:185504400-185506200	Weak transcription	Stomach Mucosa	stomach
14	chr1:185504400-185506400	Weak transcription	Psoas Muscle	Psoas
15	chr1:185504400-185511200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr1:185504800-185506200	Weak transcription	Adipose Nuclei	Adipose
17	chr1:185504800-185507000	Enhancers	Monocytes-CD14+_RO01746	blood
18	chr1:185505000-185506400	Weak transcription	Liver	Liver
19	chr1:185506000-185506200	Enhancers	Fetal Intestine Small	intestine
20	chr1:185506000-185507200	Enhancers	Primary monocytes fromperipheralblood	blood
21	chr1:185506000-185507200	Enhancers	Fetal Intestine Large	intestine

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