Variant report

Variant	rs74137662
Chromosome Location	chr1:211544564-211544565
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:211544391..211549113-chr1:211554192..211558481,8	K562	blood:
2	chr1:211542319..211548394-chr1:211548704..211553201,8	K562	blood:

Variant related genes	Relation type
ENSG00000153363	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs74137645	0.86[AFR][1000 genomes]
rs74137647	0.86[AFR][1000 genomes]
rs74137657	0.86[AFR][1000 genomes]
rs74137664	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762141	chr1:211538685-211603843	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:98 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211510600-211555400	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr1:211514800-211552200	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr1:211515000-211555000	Weak transcription	Hela-S3	cervix
4	chr1:211515000-211555800	Weak transcription	Esophagus	oesophagus
5	chr1:211515400-211548400	Weak transcription	Stomach Mucosa	stomach
6	chr1:211519400-211549000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr1:211519800-211544800	Weak transcription	Fetal Kidney	kidney
8	chr1:211519800-211547400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr1:211519800-211548600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr1:211521200-211550200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr1:211521600-211555200	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr1:211525000-211555600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr1:211525400-211550200	Weak transcription	NHDF-Ad	bronchial
14	chr1:211525400-211555000	Weak transcription	Fetal Lung	lung
15	chr1:211525600-211548200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr1:211525600-211550200	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr1:211526400-211546400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr1:211526600-211555400	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr1:211526800-211550800	Weak transcription	Small Intestine	intestine
20	chr1:211527400-211550400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr1:211528000-211551400	Strong transcription	Primary B cells from peripheral blood	blood
22	chr1:211528200-211550600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr1:211528400-211547600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr1:211528800-211554600	Weak transcription	Psoas Muscle	Psoas
25	chr1:211529400-211550400	Strong transcription	Fetal Thymus	thymus
26	chr1:211529600-211551200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr1:211530200-211555800	Weak transcription	Pancreas	Pancrea
28	chr1:211530400-211545600	Weak transcription	Lung	lung
29	chr1:211530400-211555200	Weak transcription	Brain Anterior Caudate	brain
30	chr1:211530600-211548800	Weak transcription	Fetal Intestine Small	intestine
31	chr1:211530600-211550000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr1:211530600-211555600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr1:211530800-211545400	Weak transcription	Fetal Intestine Large	intestine
34	chr1:211531000-211551600	Weak transcription	NHLF	lung
35	chr1:211531200-211550000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr1:211531200-211550000	Weak transcription	HSMM	muscle
37	chr1:211533400-211545000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr1:211533400-211547200	Weak transcription	Spleen	Spleen
39	chr1:211533400-211550200	Strong transcription	Primary T helper cells fromperipheralblood	blood
40	chr1:211533400-211551200	Strong transcription	Primary T cells fromperipheralblood	blood
41	chr1:211533400-211552000	Weak transcription	Muscle Satellite Cultured Cells	--
42	chr1:211533800-211554800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
43	chr1:211534600-211545400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr1:211534600-211546200	Weak transcription	Placenta	Placenta
45	chr1:211534600-211547400	Weak transcription	HSMMtube	muscle
46	chr1:211534600-211555800	Weak transcription	Gastric	stomach
47	chr1:211535000-211549800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr1:211535000-211555000	Weak transcription	A549	lung
49	chr1:211535400-211555800	Weak transcription	Left Ventricle	heart
50	chr1:211537200-211551200	Strong transcription	Primary T helper cells PMA-I stimulated	--

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