Variant report

Variant	rs74147663
Chromosome Location	chr10:91531367-91531368
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:91460715..91463013-chr10:91529200..91531383,2	K562	blood:

Variant related genes	Relation type
ENSG00000138182	Chromatin interaction

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs57799568	1.00[AMR][1000 genomes]
rs59618253	1.00[AMR][1000 genomes]
rs7091852	1.00[AMR][1000 genomes]
rs74147648	1.00[AMR][1000 genomes]
rs74147675	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149817	1.00[AMR][1000 genomes]
rs7897938	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054572	chr10:91471956-91537070	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv1046241	chr10:91478562-91614437	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	nsv869080	chr10:91498641-91712834	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
4	nsv1036581	chr10:91526705-91691536	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:102 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91461600-91546600	Weak transcription	Small Intestine	intestine
2	chr10:91467600-91538400	Weak transcription	Fetal Heart	heart
3	chr10:91478400-91542400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:91480800-91542200	Weak transcription	Fetal Kidney	kidney
5	chr10:91485000-91532600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr10:91504200-91531800	Weak transcription	Colon Smooth Muscle	Colon
7	chr10:91504200-91544200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr10:91505000-91536600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr10:91506400-91539800	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr10:91506400-91541200	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr10:91506400-91543800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr10:91506400-91544800	Weak transcription	Ovary	ovary
13	chr10:91506400-91549000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr10:91506600-91540000	Weak transcription	Fetal Stomach	stomach
15	chr10:91506600-91540200	Weak transcription	Fetal Intestine Small	intestine
16	chr10:91506600-91540400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr10:91506600-91542000	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr10:91506600-91543600	Weak transcription	Brain Germinal Matrix	brain
19	chr10:91506600-91554200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr10:91513800-91538400	Weak transcription	Psoas Muscle	Psoas
21	chr10:91517400-91536000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
22	chr10:91519600-91533600	Weak transcription	Right Ventricle	heart
23	chr10:91520200-91532000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
24	chr10:91521000-91542800	Weak transcription	Stomach Smooth Muscle	stomach
25	chr10:91522000-91541800	Weak transcription	Rectal Mucosa Donor 29	rectum
26	chr10:91522400-91539800	Weak transcription	Brain Angular Gyrus	brain
27	chr10:91523000-91540000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr10:91523000-91540200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr10:91523000-91549400	Weak transcription	Adipose Nuclei	Adipose
30	chr10:91523200-91533000	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr10:91523200-91540000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr10:91523200-91540000	Weak transcription	Fetal Muscle Trunk	muscle
33	chr10:91523200-91540200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr10:91523200-91540200	Weak transcription	Fetal Brain Female	brain
35	chr10:91523400-91535400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr10:91523400-91539800	Weak transcription	Duodenum Smooth Muscle	Duodenum
37	chr10:91523400-91540000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr10:91523400-91540000	Weak transcription	Placenta	Placenta
39	chr10:91523400-91540200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr10:91523400-91541400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr10:91523400-91542600	Weak transcription	Osteobl	bone
42	chr10:91523400-91549000	Weak transcription	K562	blood
43	chr10:91523600-91534400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr10:91523600-91540200	Weak transcription	Lung	lung
45	chr10:91523600-91542000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
46	chr10:91523600-91544200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr10:91525400-91535600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
48	chr10:91525600-91535200	Strong transcription	HUES64 Cell Line	embryonic stem cell
49	chr10:91526000-91536000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr10:91526000-91536200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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