Variant report

Variant	rs74150660
Chromosome Location	chr10:93128047-93128048
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs56086306	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56182786	1.00[AMR][1000 genomes]
rs56781866	1.00[AMR][1000 genomes]
rs59669716	1.00[AMR][1000 genomes]
rs60004284	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61658197	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150656	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150657	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150659	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150663	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150664	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150665	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150666	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975077	chr10:93126653-93133345	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93113800-93136600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:93126400-93128600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr10:93126800-93130200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:93127800-93128200	Enhancers	Fetal Heart	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links