The 2.0 version of rSNPBase

Variant report

Variant rs7421852
Chromosome Location chr2:113990261-113990262
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:113978200-113991800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:113980200-113991600 Weak transcription Spleen Spleen
3 chr2:113982600-113992600 Enhancers Primary hematopoietic stem cells short term culture blood
4 chr2:113982800-113990600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr2:113983400-113991600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr2:113983800-113991800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr2:113984000-113998000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr2:113985000-113991600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:113985800-113990400 Enhancers Duodenum Mucosa Duodenum
10 chr2:113985800-113990800 Enhancers Fetal Heart heart
11 chr2:113986000-113990600 Enhancers Fetal Intestine Large intestine
12 chr2:113986800-113990400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr2:113987000-113997000 Weak transcription Hela-S3 cervix
14 chr2:113987200-113990400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr2:113987600-113990400 Enhancers Adipose Nuclei Adipose
16 chr2:113987600-113992600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:113987800-113992800 Weak transcription Fetal Kidney kidney
18 chr2:113988000-113990400 Weak transcription Esophagus oesophagus
19 chr2:113988200-113990600 Enhancers K562 blood
20 chr2:113988400-113992600 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr2:113988600-113990400 Weak transcription Primary T cells from cord blood blood
22 chr2:113988600-113991600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:113988600-113992600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr2:113988800-113990400 Enhancers Left Ventricle heart
25 chr2:113988800-113990600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:113988800-113990600 Enhancers Fetal Muscle Trunk muscle
27 chr2:113988800-113990600 Enhancers Right Ventricle heart
28 chr2:113988800-113992400 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr2:113988800-113992600 Weak transcription Osteobl bone
30 chr2:113989000-113990400 Enhancers Pancreas Pancrea
31 chr2:113989000-113990400 Enhancers Stomach Mucosa stomach
32 chr2:113989000-113990600 Enhancers Right Atrium heart
33 chr2:113989000-113991400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr2:113989000-113992400 Weak transcription Fetal Thymus thymus
35 chr2:113989000-113992600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr2:113989200-113991800 Weak transcription Primary hematopoietic stem cells blood
37 chr2:113989600-113990400 Enhancers Cortex derived primary cultured neurospheres brain
38 chr2:113989600-113990600 Enhancers Placenta Placenta
39 chr2:113989600-113992600 Enhancers Fetal Muscle Leg muscle
40 chr2:113989800-113990400 Enhancers Lung lung
41 chr2:113989800-113990400 Enhancers HSMMtube muscle
42 chr2:113989800-113990400 Enhancers Monocytes-CD14+_RO01746 blood
43 chr2:113989800-113990600 Enhancers Primary monocytes fromperipheralblood blood
44 chr2:113989800-113990600 Enhancers HSMM muscle
45 chr2:113989800-113991200 Enhancers HepG2 liver
46 chr2:113990000-113990400 Enhancers Primary neutrophils fromperipheralblood blood
47 chr2:113990000-113990400 Enhancers A549 lung
48 chr2:113990000-113992000 Enhancers Muscle Satellite Cultured Cells --
49 chr2:113990200-113990600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:113990200-113991200 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015