Variant report

Variant rs744426
Chromosome Location chr2:179436020-179436021
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179388800-179441800 Weak transcription Placenta Amnion Placenta Amnion
2 chr2:179388800-179448800 Weak transcription Small Intestine intestine
3 chr2:179388800-179495800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr2:179393800-179439800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:179396000-179445400 Strong transcription Right Ventricle heart
6 chr2:179408000-179503000 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:179408200-179436200 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr2:179409200-179439200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr2:179411000-179440000 Weak transcription Brain Hippocampus Middle brain
10 chr2:179411000-179466000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr2:179411200-179440200 Weak transcription Colonic Mucosa Colon
12 chr2:179412000-179441000 Weak transcription Brain Cingulate Gyrus brain
13 chr2:179413400-179437400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:179413600-179438200 Weak transcription Duodenum Mucosa Duodenum
15 chr2:179413600-179438800 Weak transcription Brain Anterior Caudate brain
16 chr2:179413600-179440000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr2:179413800-179436800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:179414000-179439000 Weak transcription Brain Angular Gyrus brain
19 chr2:179414000-179443400 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr2:179414200-179439200 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr2:179414800-179471800 Weak transcription Brain Substantia Nigra brain
22 chr2:179417800-179441800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:179418200-179443200 Weak transcription NHLF lung
24 chr2:179418400-179439000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:179418400-179450200 Strong transcription HSMMtube muscle
26 chr2:179424000-179442200 Genic enhancers Skeletal Muscle Female skeletal muscle
27 chr2:179424200-179442400 Strong transcription Ovary ovary
28 chr2:179424600-179443000 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr2:179424800-179443000 ZNF genes & repeats Primary T cells from cord blood blood
30 chr2:179424800-179445200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr2:179425800-179440400 ZNF genes & repeats Fetal Muscle Leg muscle
32 chr2:179425800-179446800 Strong transcription Primary neutrophils fromperipheralblood blood
33 chr2:179426200-179442200 ZNF genes & repeats Primary hematopoietic stem cells blood
34 chr2:179426400-179437200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr2:179427800-179443800 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr2:179428000-179442200 Strong transcription Liver Liver
37 chr2:179428200-179439000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr2:179428400-179437200 Weak transcription Esophagus oesophagus
39 chr2:179428400-179438800 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr2:179428400-179443800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr2:179428400-179478600 Weak transcription Rectal Smooth Muscle rectum
42 chr2:179428600-179440000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:179428800-179436600 Weak transcription H1 Cell Line embryonic stem cell
44 chr2:179428800-179436600 Weak transcription Fetal Thymus thymus
45 chr2:179429200-179439400 Genic enhancers Fetal Heart heart
46 chr2:179429400-179448400 Weak transcription Colon Smooth Muscle Colon
47 chr2:179429800-179439800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:179429800-179441800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr2:179430600-179437600 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr2:179430600-179439000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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