Variant report

Variant	rs74493005
Chromosome Location	chr5:124363017-124363018
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882822	chr5:124250018-124449375	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830474	chr5:124263628-124431299	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	esv3365202	chr5:124362653-124365251	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124361000-124363400	Enhancers	Fetal Intestine Small	intestine
2	chr5:124361000-124363600	Enhancers	Fetal Intestine Large	intestine
3	chr5:124362000-124363400	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr5:124362200-124363200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr5:124362200-124363200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr5:124362400-124363200	Enhancers	H1 Cell Line	embryonic stem cell
7	chr5:124362400-124363200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr5:124362400-124363400	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr5:124362400-124363400	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr5:124362400-124363400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr5:124362400-124363400	Enhancers	Pancreas	Pancrea
12	chr5:124362400-124363600	Enhancers	Adipose Nuclei	Adipose
13	chr5:124362400-124363600	Enhancers	Liver	Liver
14	chr5:124362400-124363600	Enhancers	Rectal Mucosa Donor 29	rectum
15	chr5:124362400-124363600	Enhancers	Rectal Mucosa Donor 31	rectum
16	chr5:124362400-124363800	Enhancers	Fetal Heart	heart
17	chr5:124362600-124363400	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr5:124362600-124363400	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr5:124362600-124363400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr5:124362600-124363400	Enhancers	Fetal Kidney	kidney
21	chr5:124362600-124363400	Enhancers	Pancreatic Islets	Pancreatic Islet
22	chr5:124362600-124363400	Enhancers	Placenta Amnion	Placenta Amnion
23	chr5:124362600-124363400	Enhancers	Dnd41	blood
24	chr5:124362600-124363600	Enhancers	Stomach Mucosa	stomach
25	chr5:124362800-124363400	Enhancers	iPS-20b Cell Line	embryonic stem cell
26	chr5:124362800-124363400	Enhancers	HMEC	breast
27	chr5:124363000-124363400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
28	chr5:124363000-124363400	Weak transcription	Duodenum Mucosa	Duodenum
29	chr5:124363000-124363400	Enhancers	Gastric	stomach
30	chr5:124363000-124368000	Weak transcription	HUES64 Cell Line	embryonic stem cell
31	chr5:124363000-124368200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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