Variant report

Variant	rs7460871
Chromosome Location	chr8:124760369-124760370
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10096651	0.95[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831451	chr8:124710946-124885148	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv6373	chr8:124741567-124786609	Active TSS Genic enhancers Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124746800-124763600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr8:124756400-124761400	Weak transcription	NHEK	skin
3	chr8:124757400-124761600	Weak transcription	A549	lung
4	chr8:124757800-124761200	Weak transcription	Duodenum Mucosa	Duodenum
5	chr8:124757800-124764600	Weak transcription	Small Intestine	intestine
6	chr8:124759200-124763200	Enhancers	Fetal Intestine Large	intestine
7	chr8:124759400-124761800	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr8:124759600-124764200	Enhancers	Fetal Intestine Small	intestine
9	chr8:124760000-124760400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr8:124760200-124760800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr8:124760200-124761200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr8:124760200-124761800	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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