Variant report

Variant	rs74709370
Chromosome Location	chr9:140377030-140377031
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOSL2	chr9:140376531-140377162	MCF-7	breast:	n/a	n/a
2	MAZ	chr9:140376697-140377043	K562	blood:	n/a	n/a
3	CEBPB	chr9:140376555-140377066	MCF-7	breast:	n/a	n/a
4	MAX	chr9:140376484-140377257	A549	lung:	n/a	n/a
5	USF1	chr9:140376670-140377138	SK-N-SH_RA	brain:	n/a	chr9:140376899-140376910
6	MYC	chr9:140376986-140377163	MCF-7	breast:	n/a	n/a
7	CBX3	chr9:140376496-140377104	K562	blood:	n/a	n/a
8	GATA3	chr9:140376509-140377049	T-47D	breast:	n/a	n/a
9	USF2	chr9:140376626-140377097	Hela-S3	cervix:	n/a	n/a
10	TCF12	chr9:140376423-140377144	A549	lung:	n/a	n/a
11	MAX	chr9:140376674-140377064	K562	blood:	n/a	n/a
12	KAP1	chr9:140376497-140377098	U2OS	brain:	n/a	n/a
13	EGR1	chr9:140376745-140377046	K562	blood:	n/a	n/a
14	EP300	chr9:140376508-140377094	MCF-7	breast:	n/a	n/a
15	MAFK	chr9:140376445-140377083	K562	blood:	n/a	chr9:140376838-140376853
16	ATF1	chr9:140376674-140377053	K562	blood:	n/a	n/a
17	TEAD4	chr9:140376451-140377126	K562	blood:	n/a	n/a
18	FOSL1	chr9:140376597-140377051	K562	blood:	n/a	n/a
19	RCOR1	chr9:140376630-140377214	K562	blood:	n/a	n/a
20	FOSL2	chr9:140376633-140377034	HepG2	liver:	n/a	n/a
21	POLR2A	chr9:140376493-140377131	K562	blood:	n/a	n/a
22	EGR1	chr9:140376733-140377043	K562	blood:	n/a	n/a
23	NR2F2	chr9:140376340-140377115	MCF-7	breast:	n/a	n/a
24	MYC	chr9:140376630-140377171	K562	blood:	n/a	n/a
25	YY1	chr9:140376705-140377149	K562	blood:	n/a	chr9:140377037-140377045 chr9:140377026-140377048 chr9:140377038-140377048
26	MAX	chr9:140376509-140377256	K562	blood:	n/a	n/a
27	JUN	chr9:140376469-140377414	K562	blood:	n/a	n/a
28	NR2F2	chr9:140376448-140377209	K562	blood:	n/a	n/a
29	USF1	chr9:140376636-140377132	SK-N-SH	brain:	n/a	chr9:140376899-140376910
30	TBL1XR1	chr9:140376488-140377032	K562	blood:	n/a	n/a
31	JUND	chr9:140376602-140377034	Hela-S3	cervix:	n/a	chr9:140376837-140376848
32	USF1	chr9:140376719-140377056	A549	lung:	n/a	chr9:140376899-140376910
33	USF1	chr9:140376732-140377043	SK-N-SH_RA	brain:	n/a	chr9:140376899-140376910
34	EP300	chr9:140376475-140377031	T-47D	breast:	n/a	n/a
35	MAX	chr9:140376644-140377098	NB4	blood:	n/a	n/a
36	MAX	chr9:140376665-140377090	SK-N-SH	brain:	n/a	n/a
37	SIN3AK20	chr9:140376275-140377246	MCF-7	breast:	n/a	n/a
38	USF2	chr9:140376691-140377063	K562	blood:	n/a	n/a
39	BHLHE40	chr9:140376543-140377273	K562	blood:	n/a	n/a
40	POLR2A	chr9:140376468-140377093	HL-60	blood:	n/a	n/a
41	USF1	chr9:140376622-140377316	K562	blood:	n/a	chr9:140376899-140376910
42	SMARCB1	chr9:140376553-140377219	Hela-S3	cervix:	n/a	n/a
43	HDAC2	chr9:140376429-140377075	MCF-7	breast:	n/a	n/a
44	CEBPB	chr9:140376448-140377055	MCF-7	breast:	n/a	n/a
45	REST	chr9:140376646-140377064	A549	lung:	n/a	chr9:140377021-140377031
46	USF2	chr9:140376763-140377049	HepG2	liver:	n/a	n/a
47	USF1	chr9:140376718-140377111	ECC-1	luminal epithelium:	n/a	chr9:140376899-140376910
48	TCF12	chr9:140376238-140377276	MCF-7	breast:	n/a	n/a
49	FOS	chr9:140376557-140377037	MCF10A-Er-Src	breast:	n/a	chr9:140376837-140376848
50	USF1	chr9:140376717-140377032	HepG2	liver:	n/a	chr9:140376899-140376910

No.	Distal block	Cell Line	Cell type
1	chr9:140351004..140356661-chr9:140371273..140378307,10	MCF-7	breast:
2	chr9:140193294..140197517-chr9:140375531..140379734,5	K562	blood:
3	chr9:140195867..140198276-chr9:140376571..140378475,2	MCF-7	breast:
4	chr9:140358054..140360809-chr9:140375764..140378242,2	MCF-7	breast:
5	chr9:140195239..140196828-chr9:140374464..140377100,2	MCF-7	breast:

Variant related genes	Relation type
PNPLA7	TF binding region
ENSG00000130653	Chromatin interaction
ENSG00000198435	Chromatin interaction
ENSG00000165802	Chromatin interaction

Extended variants
information (count: 50 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:50 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894442	chr9:139544437-140462099	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	469 gene(s)	inside rSNPs	diseases
2	nsv894452	chr9:139598108-140523429	Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	450 gene(s)	inside rSNPs	diseases
3	nsv894455	chr9:139607966-140411547	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	417 gene(s)	inside rSNPs	diseases
4	nsv894463	chr9:139683224-140411547	Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv894474	chr9:139694521-140432318	Genic enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	374 gene(s)	inside rSNPs	diseases
6	nsv894484	chr9:139709976-140382705	Flanking Active TSS Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	360 gene(s)	inside rSNPs	diseases
7	nsv894485	chr9:139709976-140408904	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
8	nsv894486	chr9:139725120-140382705	Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	359 gene(s)	inside rSNPs	diseases
9	nsv894487	chr9:139725120-140449582	Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
10	nsv894499	chr9:139810595-140734161	Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
11	nsv894501	chr9:139823670-140400275	Genic enhancers Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	338 gene(s)	inside rSNPs	diseases
12	nsv894502	chr9:139823670-140487108	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	349 gene(s)	inside rSNPs	diseases
13	nsv894522	chr9:139860631-140411547	Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	331 gene(s)	inside rSNPs	diseases
14	nsv894523	chr9:139860631-140462099	Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
15	nsv894556	chr9:139904037-140408904	Active TSS Weak transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	310 gene(s)	inside rSNPs	diseases
16	nsv894562	chr9:139906359-140382705	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	307 gene(s)	inside rSNPs	diseases
17	nsv894563	chr9:139906359-140408904	Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	310 gene(s)	inside rSNPs	diseases
18	nsv894564	chr9:139906359-140432318	Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	310 gene(s)	inside rSNPs	diseases
19	nsv894583	chr9:139950351-140382705	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	297 gene(s)	inside rSNPs	diseases
20	nsv894584	chr9:139950351-140400275	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	298 gene(s)	inside rSNPs	diseases
21	nsv894607	chr9:140018138-140382705	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	274 gene(s)	inside rSNPs	diseases
22	nsv894608	chr9:140018138-140392494	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	274 gene(s)	inside rSNPs	diseases
23	nsv894609	chr9:140018138-140400275	Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	275 gene(s)	inside rSNPs	diseases
24	nsv894610	chr9:140018138-140408904	Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	277 gene(s)	inside rSNPs	diseases
25	nsv894627	chr9:140068342-140382705	Genic enhancers Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	268 gene(s)	inside rSNPs	diseases
26	nsv894628	chr9:140068342-140400275	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	269 gene(s)	inside rSNPs	diseases
27	nsv531664	chr9:140110329-140725056	ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	275 gene(s)	inside rSNPs	diseases
28	nsv531654	chr9:140110329-141033187	Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	281 gene(s)	inside rSNPs	diseases
29	esv1824250	chr9:140118448-140390615	Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	230 gene(s)	inside rSNPs	diseases
30	nsv894645	chr9:140165584-140408904	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
31	nsv1047563	chr9:140219047-140560852	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
32	nsv540357	chr9:140219047-140560852	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
33	nsv531602	chr9:140240417-140535223	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	96 gene(s)	inside rSNPs	diseases
34	nsv932633	chr9:140240417-141053535	Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
35	nsv894654	chr9:140243547-140382705	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
36	nsv894655	chr9:140243547-140392494	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
37	nsv1035524	chr9:140251014-140751633	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
38	nsv1053628	chr9:140260666-141005637	Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
39	nsv534215	chr9:140286134-141008915	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	n/a
40	nsv894660	chr9:140301447-140411547	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	55 gene(s)	inside rSNPs	n/a
41	nsv1035388	chr9:140306746-140654768	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	96 gene(s)	inside rSNPs	n/a
42	nsv831762	chr9:140338779-140514107	Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	n/a
43	nsv1039672	chr9:140343466-140707505	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	n/a
44	nsv540358	chr9:140343466-140707505	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	n/a
45	nsv1041512	chr9:140350404-140612859	Strong transcription Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	n/a
46	nsv540359	chr9:140350404-140612859	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	n/a
47	nsv540360	chr9:140360372-140391898	Bivalent Enhancer Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	n/a
48	nsv616022	chr9:140372570-140523429	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	n/a
49	nsv616023	chr9:140372570-140602887	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	n/a
50	nsv540361	chr9:140376959-140415925	Bivalent Enhancer Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140370800-140383400	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr9:140371000-140385800	Weak transcription	Primary B cells from peripheral blood	blood
3	chr9:140371200-140382200	Weak transcription	Brain Anterior Caudate	brain
4	chr9:140371200-140383200	Weak transcription	Primary B cells from cord blood	blood
5	chr9:140371800-140382000	Weak transcription	Fetal Intestine Small	intestine
6	chr9:140373000-140377600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr9:140373200-140377400	Bivalent Enhancer	Placenta	Placenta
8	chr9:140373800-140377600	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr9:140373800-140396000	Weak transcription	Esophagus	oesophagus
10	chr9:140374000-140377200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr9:140374000-140386200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr9:140374600-140385800	Weak transcription	Brain Hippocampus Middle	brain
13	chr9:140375000-140392200	Weak transcription	Brain Angular Gyrus	brain
14	chr9:140375400-140382200	Weak transcription	Lung	lung
15	chr9:140375400-140386000	Weak transcription	Aorta	Aorta
16	chr9:140375400-140387600	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr9:140375600-140377200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr9:140375600-140379000	Weak transcription	Pancreas	Pancrea
19	chr9:140375800-140377200	Enhancers	Fetal Muscle Trunk	muscle
20	chr9:140375800-140377400	Enhancers	HMEC	breast
21	chr9:140375800-140377600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr9:140376000-140379000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr9:140376400-140377200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr9:140376400-140377200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr9:140376400-140377200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr9:140376400-140377200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr9:140376400-140377200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr9:140376400-140377200	Enhancers	Breast Myoepithelial Primary Cells	Breast
29	chr9:140376400-140377200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr9:140376400-140377200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr9:140376400-140377200	Enhancers	Muscle Satellite Cultured Cells	--
32	chr9:140376400-140377200	Enhancers	Adipose Nuclei	Adipose
33	chr9:140376400-140377200	Enhancers	Liver	Liver
34	chr9:140376400-140377200	Enhancers	Fetal Muscle Leg	muscle
35	chr9:140376400-140377200	Enhancers	Ovary	ovary
36	chr9:140376400-140377200	Enhancers	Skeletal Muscle Male	skeletal muscle
37	chr9:140376400-140377200	Flanking Active TSS	Hela-S3	cervix
38	chr9:140376400-140377200	Enhancers	HSMMtube	muscle
39	chr9:140376400-140377200	Flanking Active TSS	K562	blood
40	chr9:140376400-140377400	Enhancers	Primary monocytes fromperipheralblood	blood
41	chr9:140376400-140377400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr9:140376400-140377800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
43	chr9:140376400-140377800	Enhancers	HepG2	liver
44	chr9:140376600-140377200	Enhancers	Right Ventricle	heart
45	chr9:140376600-140377200	Enhancers	Spleen	Spleen
46	chr9:140376600-140377200	Enhancers	HSMM	muscle
47	chr9:140376600-140377200	Enhancers	HUVEC	blood vessel
48	chr9:140376600-140377200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
49	chr9:140376600-140377200	Enhancers	NHLF	lung
50	chr9:140376600-140377800	Enhancers	NH-A	brain

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