Variant report

Variant	rs74726019
Chromosome Location	chr6:54780286-54780287
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885900	chr6:54517968-54852462	Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv2763553	chr6:54687979-54820487	Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	esv3472599	chr6:54780211-54780720	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3501372	chr6:54780213-54780743	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3501371	chr6:54780216-54780735	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3472601	chr6:54780232-54780701	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3501373	chr6:54780236-54780671	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3472597	chr6:54780243-54780706	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3501376	chr6:54780253-54780689	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3472600	chr6:54780256-54780657	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54765800-54780800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:54769000-54780800	Weak transcription	NHEK	skin
3	chr6:54770000-54781200	Weak transcription	HMEC	breast
4	chr6:54774800-54781200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:54775600-54780800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr6:54775600-54781400	Weak transcription	Duodenum Mucosa	Duodenum
7	chr6:54775600-54788400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr6:54776000-54781400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:54776000-54796800	Weak transcription	Fetal Intestine Small	intestine
10	chr6:54778400-54785600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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