Variant report

Variant	rs74769896
Chromosome Location	chr5:118864899-118864900
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:118863717..118866521-chr5:118868164..118871056,3	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427732	chr5:118730999-119034741	Strong transcription Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv1024455	chr5:118770429-119487982	Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv1016271	chr5:118836891-119487982	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv882776	chr5:118859546-118915408	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv969943	chr5:118864122-118868093	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:118804200-118879600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr5:118832400-118878200	Weak transcription	NH-A	brain
3	chr5:118832600-118868600	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr5:118838000-118869200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr5:118840200-118878400	Weak transcription	Psoas Muscle	Psoas
6	chr5:118841000-118880000	Weak transcription	Brain Germinal Matrix	brain
7	chr5:118841200-118880000	Weak transcription	A549	lung
8	chr5:118841400-118873200	Weak transcription	Fetal Brain Male	brain
9	chr5:118845800-118868800	Weak transcription	Fetal Heart	heart
10	chr5:118846800-118878200	Weak transcription	NHLF	lung
11	chr5:118847000-118868000	Weak transcription	K562	blood
12	chr5:118847200-118873200	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr5:118847200-118877800	Weak transcription	Small Intestine	intestine
14	chr5:118847200-118878200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr5:118847200-118879800	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr5:118847400-118872000	Weak transcription	Skeletal Muscle Male	skeletal muscle
17	chr5:118847400-118873000	Weak transcription	Fetal Muscle Trunk	muscle
18	chr5:118847400-118873200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr5:118847400-118873800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr5:118847400-118875800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr5:118847400-118876000	Weak transcription	Colonic Mucosa	Colon
22	chr5:118847400-118878200	Weak transcription	Rectal Smooth Muscle	rectum
23	chr5:118847400-118879800	Weak transcription	HSMMtube	muscle
24	chr5:118847600-118865000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr5:118847600-118873200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr5:118847600-118873400	Weak transcription	Fetal Muscle Leg	muscle
27	chr5:118847600-118873600	Weak transcription	Cortex derived primary cultured neurospheres	brain
28	chr5:118847600-118877600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr5:118847600-118878200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr5:118847600-118879800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
31	chr5:118850000-118865600	Weak transcription	GM12878-XiMat	blood
32	chr5:118851800-118876400	Weak transcription	Primary neutrophils fromperipheralblood	blood
33	chr5:118852800-118878200	Weak transcription	Aorta	Aorta
34	chr5:118853000-118880200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr5:118853400-118878200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr5:118853400-118878200	Weak transcription	Esophagus	oesophagus
37	chr5:118853400-118878200	Weak transcription	Gastric	stomach
38	chr5:118854200-118875600	Weak transcription	Pancreas	Pancrea
39	chr5:118854400-118877600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr5:118854400-118878400	Weak transcription	Spleen	Spleen
41	chr5:118854400-118879600	Weak transcription	Fetal Kidney	kidney
42	chr5:118854400-118880600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr5:118854800-118875600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
44	chr5:118854800-118877600	Weak transcription	Fetal Intestine Small	intestine
45	chr5:118854800-118878200	Weak transcription	Thymus	Thymus
46	chr5:118855200-118867000	Weak transcription	Brain Anterior Caudate	brain
47	chr5:118855200-118873200	Weak transcription	Stomach Smooth Muscle	stomach
48	chr5:118855400-118874200	Weak transcription	Ovary	ovary
49	chr5:118855400-118875800	Weak transcription	Brain Cingulate Gyrus	brain
50	chr5:118855400-118876400	Weak transcription	Lung	lung

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