Variant report

Variant rs7485824
Chromosome Location chr12:48552425-48552426
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48551800-48554000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr12:48551800-48554400 Weak transcription Brain Germinal Matrix brain
3 chr12:48552000-48552800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr12:48552000-48553200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr12:48552000-48553400 Enhancers Primary T helper cells fromperipheralblood blood
6 chr12:48552000-48553800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr12:48552000-48554000 Weak transcription Brain Cingulate Gyrus brain
8 chr12:48552000-48554000 Weak transcription Brain Hippocampus Middle brain
9 chr12:48552000-48554400 Weak transcription Brain Anterior Caudate brain
10 chr12:48552000-48554600 Weak transcription Fetal Lung lung
11 chr12:48552000-48554600 Weak transcription Fetal Muscle Trunk muscle
12 chr12:48552000-48555800 Enhancers Primary hematopoietic stem cells blood
13 chr12:48552000-48556600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr12:48552000-48557800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr12:48552200-48552800 Enhancers Primary T cells fromperipheralblood blood
16 chr12:48552200-48553000 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr12:48552200-48553200 Enhancers Primary T helper cells PMA-I stimulated --
18 chr12:48552200-48553200 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr12:48552200-48553200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr12:48552200-48553200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr12:48552200-48553200 Weak transcription GM12878-XiMat blood
22 chr12:48552200-48553800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr12:48552200-48553800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr12:48552200-48554000 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr12:48552200-48554000 Weak transcription Brain Inferior Temporal Lobe brain
26 chr12:48552200-48554000 Weak transcription Fetal Heart heart
27 chr12:48552200-48554200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr12:48552200-48554600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr12:48552200-48554600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr12:48552200-48554600 Weak transcription Esophagus oesophagus
31 chr12:48552200-48554600 Weak transcription Fetal Thymus thymus
32 chr12:48552200-48554600 Weak transcription Psoas Muscle Psoas
33 chr12:48552200-48554600 Weak transcription K562 blood
34 chr12:48552200-48554800 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr12:48552200-48554800 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr12:48552200-48556600 Enhancers Skeletal Muscle Female skeletal muscle
37 chr12:48552400-48552800 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr12:48552400-48552800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr12:48552400-48552800 Weak transcription Duodenum Mucosa Duodenum

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