Variant report

Variant	rs750913
Chromosome Location	chr10:22930547-22930548
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22928174..22930597-chr10:22933685..22936850,3	K562	blood:
2	chr10:22916861..22924296-chr10:22924379..22934526,17	K562	blood:
3	chr10:22930057..22932318-chr10:22937347..22939667,3	K562	blood:
4	chr10:22922677..22924521-chr10:22929948..22932446,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1750777	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1830947	chr10:22881196-23004381	Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv831809	chr10:22918101-23069676	Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22915000-22951800	Weak transcription	Fetal Intestine Small	intestine
2	chr10:22915200-22935600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr10:22915200-22936200	Weak transcription	Psoas Muscle	Psoas
4	chr10:22915400-22935400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr10:22919200-22931600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr10:22919800-22935000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr10:22920000-22931800	Weak transcription	Fetal Lung	lung
8	chr10:22920000-22931800	Weak transcription	NHLF	lung
9	chr10:22920000-22935000	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr10:22920000-22936400	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr10:22920200-22935200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr10:22920400-22930600	Weak transcription	Aorta	Aorta
13	chr10:22920800-22933600	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr10:22921000-22933000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr10:22921000-22940400	Weak transcription	Ovary	ovary
16	chr10:22921200-22935000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr10:22921200-22935400	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr10:22922800-22933000	Weak transcription	Lung	lung
19	chr10:22923000-22937600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr10:22923200-22932400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
21	chr10:22923200-22936200	Weak transcription	Esophagus	oesophagus
22	chr10:22923600-22930800	Enhancers	Primary T helper naive cells from peripheral blood	blood
23	chr10:22924800-22932000	Weak transcription	Small Intestine	intestine
24	chr10:22925600-22931000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr10:22925600-22931800	Weak transcription	Duodenum Mucosa	Duodenum
26	chr10:22926000-22938600	Weak transcription	Primary monocytes fromperipheralblood	blood
27	chr10:22926200-22935200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr10:22926600-22930800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
29	chr10:22926800-22931000	Weak transcription	Primary B cells from cord blood	blood
30	chr10:22926800-22932000	Weak transcription	K562	blood
31	chr10:22926800-22932200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr10:22926800-22932400	Weak transcription	Fetal Thymus	thymus
33	chr10:22926800-22932400	Weak transcription	Pancreas	Pancrea
34	chr10:22926800-22932600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr10:22926800-22933000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr10:22926800-22933000	Weak transcription	Spleen	Spleen
37	chr10:22926800-22935000	Weak transcription	Thymus	Thymus
38	chr10:22926800-22936200	Weak transcription	HSMMtube	muscle
39	chr10:22927000-22936200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr10:22927000-22936200	Weak transcription	Right Ventricle	heart
41	chr10:22927800-22942800	Enhancers	Brain Anterior Caudate	brain
42	chr10:22928200-22932600	Weak transcription	Primary B cells from peripheral blood	blood
43	chr10:22929200-22930600	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
44	chr10:22929200-22931200	Genic enhancers	Primary T cells fromperipheralblood	blood
45	chr10:22929200-22938600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
46	chr10:22929400-22930600	Weak transcription	Brain Inferior Temporal Lobe	brain
47	chr10:22929400-22931200	Strong transcription	Monocytes-CD14+_RO01746	blood
48	chr10:22929400-22934200	Enhancers	Brain Substantia Nigra	brain
49	chr10:22929600-22930800	Weak transcription	Left Ventricle	heart
50	chr10:22929600-22931800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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