The 2.0 version of rSNPBase

Variant report

Variant rs7525167
Chromosome Location chr1:173371778-173371779
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173347200-173375000 Weak transcription Spleen Spleen
2 chr1:173348600-173389400 Weak transcription Right Ventricle heart
3 chr1:173354000-173379800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:173354800-173376000 Weak transcription Primary B cells from cord blood blood
5 chr1:173355400-173379800 Weak transcription Pancreas Pancrea
6 chr1:173362600-173381200 Weak transcription Ovary ovary
7 chr1:173362800-173374400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:173362800-173375800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:173362800-173379800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:173362800-173382600 Weak transcription Fetal Heart heart
11 chr1:173363000-173374200 Weak transcription HMEC breast
12 chr1:173363000-173374400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:173363000-173375800 Weak transcription K562 blood
14 chr1:173363000-173379000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:173363400-173374200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:173363800-173389400 Weak transcription Fetal Lung lung
17 chr1:173364000-173374200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:173364000-173376000 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:173365000-173385200 Weak transcription Fetal Stomach stomach
20 chr1:173365200-173372400 Weak transcription HSMMtube muscle
21 chr1:173365200-173382600 Weak transcription Fetal Muscle Leg muscle
22 chr1:173365600-173375800 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:173365600-173376000 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr1:173367200-173375800 Weak transcription Thymus Thymus
25 chr1:173367800-173379600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:173369200-173376000 Weak transcription Lung lung
27 chr1:173370400-173372000 Enhancers Colon Smooth Muscle Colon
28 chr1:173370600-173371800 Enhancers Rectal Smooth Muscle rectum
29 chr1:173370600-173372000 Enhancers Skeletal Muscle Female skeletal muscle
30 chr1:173370600-173378600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:173370800-173376000 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr1:173370800-173379400 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:173370800-173382600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:173370800-173389200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr1:173370800-173389200 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr1:173370800-173389400 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:173370800-173389400 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:173370800-173389400 Weak transcription Aorta Aorta
39 chr1:173371000-173374400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:173371200-173372000 Enhancers Stomach Smooth Muscle stomach
41 chr1:173371400-173372000 Enhancers Psoas Muscle Psoas
42 chr1:173371400-173375800 Enhancers GM12878-XiMat blood
43 chr1:173371400-173378200 Weak transcription Primary T cells from cord blood blood
44 chr1:173371600-173371800 Enhancers Primary B cells from peripheral blood blood
45 chr1:173371600-173371800 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015