Variant report
Variant | rs7525401 |
---|---|
Chromosome Location | chr1:211380770-211380771 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1361193 | 0.95[AFR][1000 genomes];0.84[ASN][1000 genomes] |
rs1572649 | 0.96[ASN][1000 genomes] |
rs3111244 | 0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs3125839 | 0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs61848652 | 0.82[AMR][1000 genomes];0.99[ASN][1000 genomes] |
rs7554504 | 0.87[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv1806574 | chr1:211369721-211383129 | ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
2 | esv1808906 | chr1:211369721-211383129 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
3 | nsv945277 | chr1:211377389-211382878 | Enhancers | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
No data |