The 2.0 version of rSNPBase

Variant report

Variant rs7535429
Chromosome Location chr1:212333545-212333546
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212309000-212347200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:212323600-212335800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:212324600-212340400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:212326400-212335000 Weak transcription Small Intestine intestine
5 chr1:212328400-212334600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:212330800-212336800 Enhancers Fetal Thymus thymus
7 chr1:212331000-212334400 Weak transcription NHEK skin
8 chr1:212331000-212334600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:212331000-212334600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:212331000-212335800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:212331000-212335800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr1:212331200-212334400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:212331200-212334400 Weak transcription HMEC breast
14 chr1:212331800-212335800 Enhancers Primary T cells from cord blood blood
15 chr1:212331800-212336600 Enhancers Primary T helper cells fromperipheralblood blood
16 chr1:212332200-212334600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:212332600-212335600 Weak transcription Duodenum Mucosa Duodenum
18 chr1:212332800-212334200 Weak transcription Psoas Muscle Psoas
19 chr1:212332800-212334400 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:212332800-212334600 Weak transcription Right Atrium heart
21 chr1:212332800-212334800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr1:212332800-212335600 Weak transcription Adipose Nuclei Adipose
23 chr1:212332800-212337600 Enhancers Thymus Thymus
24 chr1:212333000-212334200 Weak transcription HSMM muscle
25 chr1:212333000-212334200 Weak transcription HSMMtube muscle
26 chr1:212333000-212334400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:212333000-212334400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr1:212333000-212334600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:212333000-212334600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr1:212333000-212334600 Weak transcription Stomach Mucosa stomach
31 chr1:212333000-212334600 Enhancers GM12878-XiMat blood
32 chr1:212333000-212334800 Weak transcription Left Ventricle heart
33 chr1:212333000-212335000 Weak transcription Right Ventricle heart
34 chr1:212333000-212335400 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:212333000-212335600 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr1:212333000-212335600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:212333000-212335800 Weak transcription Fetal Muscle Trunk muscle
38 chr1:212333000-212342000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:212333200-212334200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:212333200-212334200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:212333200-212334200 Weak transcription Esophagus oesophagus
42 chr1:212333200-212334200 Weak transcription Dnd41 blood
43 chr1:212333200-212334400 Weak transcription Primary hematopoietic stem cells blood
44 chr1:212333200-212334400 Weak transcription K562 blood
45 chr1:212333200-212334800 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr1:212333200-212334800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr1:212333200-212334800 Weak transcription Lung lung
48 chr1:212333200-212335000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:212333200-212335200 Weak transcription Primary T cells fromperipheralblood blood
50 chr1:212333200-212335600 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015