Variant report

Variant rs7540063
Chromosome Location chr1:145038441-145038442
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145036800-145039000 Active TSS Right Ventricle heart
2 chr1:145037400-145040600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr1:145038000-145038600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
4 chr1:145038000-145039200 Flanking Active TSS Brain Angular Gyrus brain
5 chr1:145038000-145039600 Flanking Active TSS Osteobl bone
6 chr1:145038000-145041600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
7 chr1:145038200-145038600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:145038200-145038600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:145038200-145038600 Enhancers Liver Liver
10 chr1:145038200-145038600 Flanking Active TSS Left Ventricle heart
11 chr1:145038200-145038600 Bivalent/Poised TSS Lung lung
12 chr1:145038200-145038600 Flanking Active TSS Right Atrium heart
13 chr1:145038200-145038600 Enhancers K562 blood
14 chr1:145038200-145038800 Flanking Active TSS Aorta Aorta
15 chr1:145038200-145038800 Bivalent Enhancer Colon Smooth Muscle Colon
16 chr1:145038200-145038800 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
17 chr1:145038200-145038800 Flanking Active TSS HSMMtube muscle
18 chr1:145038200-145039000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
19 chr1:145038200-145039000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:145038200-145039000 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
21 chr1:145038200-145039000 Bivalent/Poised TSS Rectal Smooth Muscle rectum
22 chr1:145038200-145039200 Flanking Active TSS Brain Anterior Caudate brain
23 chr1:145038200-145039200 Flanking Active TSS Brain Inferior Temporal Lobe brain
24 chr1:145038200-145039200 Flanking Active TSS Psoas Muscle Psoas
25 chr1:145038200-145039200 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
26 chr1:145038200-145039200 Bivalent Enhancer Stomach Mucosa stomach
27 chr1:145038200-145039200 Transcr. at gene 5' and 3' HSMM muscle
28 chr1:145038200-145039400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:145038200-145039400 Flanking Active TSS Brain Cingulate Gyrus brain
30 chr1:145038200-145039400 Flanking Active TSS Brain Hippocampus Middle brain
31 chr1:145038200-145039400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
32 chr1:145038200-145039400 Flanking Active TSS Brain Substantia Nigra brain
33 chr1:145038200-145039600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:145038200-145039600 Flanking Active TSS Muscle Satellite Cultured Cells --
35 chr1:145038200-145039600 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
36 chr1:145038200-145039600 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
37 chr1:145038200-145039600 Flanking Active TSS Fetal Brain Male brain
38 chr1:145038200-145039800 Flanking Bivalent TSS/Enh Fetal Brain Female brain
39 chr1:145038200-145040000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:145038200-145040400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
41 chr1:145038200-145040400 Flanking Active TSS NHLF lung
42 chr1:145038400-145038600 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
43 chr1:145038400-145038600 Bivalent/Poised TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:145038400-145038600 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
45 chr1:145038400-145038600 Bivalent/Poised TSS Primary T killer naive cells fromperipheralblood blood
46 chr1:145038400-145038600 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
47 chr1:145038400-145038600 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
48 chr1:145038400-145038800 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:145038400-145038800 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
50 chr1:145038400-145038800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell

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