Variant report

Variant	rs75431302
Chromosome Location	chr8:42563019-42563020
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530880	chr8:41895241-42755506	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv1034724	chr8:42386707-42772203	Enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
3	nsv1030451	chr8:42543326-42618390	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv1034121	chr8:42549810-42618713	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:42551400-42566400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:42560800-42563800	Weak transcription	Thymus	Thymus
3	chr8:42561600-42565200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:42562400-42563800	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr8:42562600-42563800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr8:42562600-42564200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr8:42562800-42563600	Enhancers	Primary T cells from cord blood	blood
8	chr8:42562800-42563600	Enhancers	Ovary	ovary
9	chr8:42562800-42564000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr8:42562800-42569400	Enhancers	Primary T cells fromperipheralblood	blood
11	chr8:42563000-42563400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr8:42563000-42569200	Enhancers	Primary T helper cells fromperipheralblood	blood
13	chr8:42563000-42569200	Enhancers	Primary T killer memory cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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