| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv899377 |
chr12:85157346-85629241 |
Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1040452 |
chr12:85179586-85747907 |
Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv1792335 |
chr12:85321249-86003609 |
Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv899387 |
chr12:85427691-85629241 |
Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv455669 |
chr12:85427691-85638089 |
Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv559653 |
chr12:85427691-85638089 |
Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv899388 |
chr12:85427691-85766847 |
Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv455670 |
chr12:85465932-85603531 |
Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv559654 |
chr12:85465932-85603531 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv1052676 |
chr12:85466799-85556788 |
Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv559655 |
chr12:85492871-85512367 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv1040622 |
chr12:85502226-85693132 |
Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv541558 |
chr12:85502226-85693132 |
Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page:
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