The 2.0 version of rSNPBase

Variant report

Variant rs7546454
Chromosome Location chr1:145401138-145401139
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145398200-145402000 Weak transcription Liver Liver
2 chr1:145399600-145401800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr1:145399600-145401800 Weak transcription Brain Hippocampus Middle brain
4 chr1:145399600-145402800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:145399600-145405600 Weak transcription HSMMtube muscle
6 chr1:145399800-145401400 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr1:145399800-145401600 Weak transcription Brain Cingulate Gyrus brain
8 chr1:145399800-145401800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:145399800-145403000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:145399800-145409000 Weak transcription HSMM muscle
11 chr1:145400000-145401400 Weak transcription Primary B cells from cord blood blood
12 chr1:145400000-145401600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:145400000-145401600 Weak transcription Fetal Muscle Leg muscle
14 chr1:145400000-145401800 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr1:145400000-145401800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:145400000-145401800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:145400000-145401800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:145400000-145402000 Weak transcription Primary B cells from peripheral blood blood
19 chr1:145400000-145402000 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:145400000-145402000 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr1:145400000-145402000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:145400000-145402000 Weak transcription Brain Substantia Nigra brain
23 chr1:145400000-145402600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:145400000-145402800 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:145400000-145402800 Weak transcription Brain Anterior Caudate brain
26 chr1:145400000-145402800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:145400000-145413200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr1:145400200-145401400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:145400200-145401600 Weak transcription Primary hematopoietic stem cells blood
30 chr1:145400200-145401600 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr1:145400200-145401600 Weak transcription GM12878-XiMat blood
32 chr1:145400200-145401600 Weak transcription K562 blood
33 chr1:145400200-145401800 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:145400200-145401800 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:145400200-145401800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:145400200-145401800 Weak transcription A549 lung
37 chr1:145400200-145401800 Weak transcription Dnd41 blood
38 chr1:145400200-145402000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:145400200-145402000 Weak transcription Brain Angular Gyrus brain
40 chr1:145400200-145403400 Enhancers HepG2 liver
41 chr1:145400200-145405600 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015