Variant report

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr1:57289743-57289943	HepG2	liver:	n/a	n/a
2	MAFK	chr1:57289716-57289916	HepG2	liver:	n/a	n/a

No data

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No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:57287548..57290012-chr1:57292988..57294637,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C1orf168-1	chr1:57289361-57290819	XLOC_000847
2	lnc-C1orf168-1	chr1:57289352-57290819	ENSG00000229913.1

No data

Variant related genes	Relation type
C1orf168	TF binding region

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1891415	0.81[JPT][hapmap]
rs6670596	0.83[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869295	chr1:56894955-57656562	Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:57285400-57305400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:57287200-57289800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr1:57287200-57289800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr1:57287200-57290000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr1:57287200-57290200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr1:57287200-57291000	Weak transcription	NH-A	brain
7	chr1:57287200-57291600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr1:57289600-57291400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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