Variant report

Variant	rs75513405
Chromosome Location	chr1:226985552-226985553
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:226978580..226982685-chr1:226985277..226987970,3	K562	blood:
2	chr1:226985091..226988081-chr1:226993842..226996201,2	K562	blood:
3	chr1:226984451..226988514-chr1:226988953..226993290,5	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2582920	chr1:226984500-226986312	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
2	esv1792031	chr1:226985006-226986731	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv1823821	chr1:226985006-226986731	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv1802500	chr1:226985006-226987232	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:226966600-226986400	Weak transcription	Right Atrium	heart
2	chr1:226971600-226986800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:226976400-226986400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr1:226976600-226986400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr1:226977000-226986800	Weak transcription	Rectal Smooth Muscle	rectum
6	chr1:226982400-226986800	Weak transcription	HUVEC	blood vessel
7	chr1:226983600-226988600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr1:226984400-226986400	Enhancers	Primary T cells fromperipheralblood	blood
9	chr1:226984400-226986400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
10	chr1:226984400-226986400	Enhancers	GM12878-XiMat	blood
11	chr1:226984400-226986800	Enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr1:226984400-226989200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr1:226984600-226986200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
14	chr1:226984800-226986200	Enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr1:226984800-226986200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr1:226984800-226986600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr1:226984800-226987600	Enhancers	K562	blood
18	chr1:226985000-226986400	Enhancers	Primary T helper cells fromperipheralblood	blood
19	chr1:226985000-226988200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
20	chr1:226985000-226988800	Enhancers	Fetal Thymus	thymus
21	chr1:226985000-226990000	Enhancers	Primary T cells from cord blood	blood
22	chr1:226985200-226985600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
23	chr1:226985200-226986000	Weak transcription	Thymus	Thymus
24	chr1:226985200-226986200	Enhancers	Primary T helper cells PMA-I stimulated	--
25	chr1:226985200-226986800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
26	chr1:226985400-226986400	Weak transcription	Spleen	Spleen
27	chr1:226985400-226987200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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