Variant report

Variant rs75542062
Chromosome Location chr1:85241130-85241131
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85238000-85241200 Enhancers HMEC breast
2 chr1:85238600-85242000 Weak transcription Osteobl bone
3 chr1:85239000-85241400 Weak transcription Stomach Smooth Muscle stomach
4 chr1:85239200-85244800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:85239600-85241200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:85239600-85241200 Enhancers Brain Anterior Caudate brain
7 chr1:85239600-85241200 Enhancers Pancreas Pancrea
8 chr1:85239800-85241200 Enhancers Brain Inferior Temporal Lobe brain
9 chr1:85240000-85241200 Weak transcription NHEK skin
10 chr1:85240000-85241600 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr1:85240200-85245200 Weak transcription Brain Cingulate Gyrus brain
12 chr1:85240400-85244800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:85240600-85241200 Enhancers H1 Cell Line embryonic stem cell
14 chr1:85240600-85243200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:85240800-85241400 Enhancers ES-WA7 Cell Line embryonic stem cell
16 chr1:85240800-85245000 Weak transcription Brain Hippocampus Middle brain
17 chr1:85240800-85246200 Weak transcription Esophagus oesophagus
18 chr1:85241000-85243200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:85241000-85247600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr1:85241000-85263600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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