Variant report

Variant	rs75561828
Chromosome Location	chr9:72274380-72274381
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:72271323..72273681-chr9:72274273..72277521,4	K562	blood:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471309	chr9:72273898-72410323	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72253000-72285000	Weak transcription	Fetal Brain Female	brain
2	chr9:72253400-72274400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr9:72260600-72286200	Weak transcription	Aorta	Aorta
4	chr9:72262600-72285400	Weak transcription	Brain Cingulate Gyrus	brain
5	chr9:72262800-72275600	Weak transcription	Brain Hippocampus Middle	brain
6	chr9:72264600-72275200	Weak transcription	Fetal Stomach	stomach
7	chr9:72272200-72276400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr9:72272600-72276000	Enhancers	Liver	Liver
9	chr9:72273000-72285600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr9:72273800-72274600	Enhancers	Duodenum Smooth Muscle	Duodenum
11	chr9:72273800-72275600	Enhancers	Fetal Lung	lung
12	chr9:72273800-72282600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr9:72274000-72274400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
14	chr9:72274000-72274400	Active TSS	Fetal Brain Male	brain
15	chr9:72274000-72274600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr9:72274000-72274600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr9:72274000-72274600	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr9:72274000-72274600	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr9:72274000-72274600	Enhancers	Brain Anterior Caudate	brain
20	chr9:72274000-72274600	Enhancers	Fetal Kidney	kidney
21	chr9:72274000-72274800	Enhancers	ES-I3 Cell Line	embryonic stem cell
22	chr9:72274000-72274800	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr9:72274000-72274800	Enhancers	Ovary	ovary
24	chr9:72274000-72275400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr9:72274000-72275800	Enhancers	HUES48 Cell Line	embryonic stem cell
26	chr9:72274200-72274600	Enhancers	Brain Angular Gyrus	brain

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