Variant report

Variant	rs755780
Chromosome Location	chr1:226776224-226776225
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:226746395..226748135-chr1:226774480..226777124,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs12031880	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12035052	1.00[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4653758	0.87[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs497911	1.00[CEU][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:226763000-226777200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:226765000-226790000	Weak transcription	Right Atrium	heart
3	chr1:226765600-226776800	Weak transcription	Fetal Muscle Trunk	muscle
4	chr1:226765600-226777400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr1:226774400-226776800	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr1:226774600-226776800	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr1:226774800-226790200	Weak transcription	Fetal Intestine Small	intestine
8	chr1:226775200-226777600	Enhancers	Ovary	ovary
9	chr1:226775400-226776800	Enhancers	Stomach Smooth Muscle	stomach
10	chr1:226775400-226777600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr1:226775400-226778400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr1:226775600-226776600	Enhancers	Skeletal Muscle Female	skeletal muscle
13	chr1:226775600-226776800	Enhancers	Spleen	Spleen
14	chr1:226775800-226777200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr1:226775800-226777400	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr1:226775800-226777600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr1:226775800-226777600	Enhancers	Pancreas	Pancrea
18	chr1:226776000-226776800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr1:226776000-226777200	Enhancers	Fetal Muscle Leg	muscle
20	chr1:226776200-226776600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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