| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv1826830 |
chr3:19982972-20632072 |
Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
29 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1001006 |
chr3:20110743-20752628 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv536512 |
chr3:20110743-20752628 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv1833208 |
chr3:20157077-20638228 |
Active TSS Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv1826144 |
chr3:20164282-20638228 |
Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv1829847 |
chr3:20196923-20638228 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv876598 |
chr3:20242143-20970042 |
Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv876599 |
chr3:20264950-20813009 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv876600 |
chr3:20273130-20674832 |
Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv876603 |
chr3:20626326-20727885 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv2280170 |
chr3:20630273-20630274 |
Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page:
1
