Variant report

Variant	rs7567241
Chromosome Location	chr2:184342028-184342029
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1438017	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4233772	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4233773	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4666913	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4666915	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4666916	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62197582	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62197587	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7567725	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv988081	chr2:184342009-184342583	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv9793	chr2:184342024-184342583	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:184341600-184342200	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr2:184341800-184342400	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr2:184342000-184342200	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr2:184342000-184342400	Enhancers	H9 Cell Line	embryonic stem cell
5	chr2:184342000-184342400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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