The 2.0 version of rSNPBase

Variant report

Variant rs75717456
Chromosome Location chr10:89852441-89852442
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89839400-89855000 Weak transcription Lung lung
2 chr10:89848800-89852800 Enhancers HMEC breast
3 chr10:89848800-89856200 Enhancers Fetal Thymus thymus
4 chr10:89849400-89852800 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr10:89849400-89852800 Weak transcription Pancreas Pancrea
6 chr10:89849400-89853200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr10:89849400-89853400 Enhancers Primary T helper cells PMA-I stimulated --
8 chr10:89849400-89854200 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr10:89849400-89854600 Enhancers Primary monocytes fromperipheralblood blood
10 chr10:89849600-89852600 Weak transcription Fetal Lung lung
11 chr10:89849600-89853200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr10:89849600-89853200 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr10:89849600-89853200 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr10:89849600-89853400 Enhancers Primary T helper cells fromperipheralblood blood
15 chr10:89849600-89853600 Enhancers Primary T killer memory cells from peripheral blood blood
16 chr10:89849800-89852800 Enhancers Primary hematopoietic stem cells blood
17 chr10:89850000-89852600 Weak transcription Liver Liver
18 chr10:89850000-89853000 Enhancers Primary B cells from peripheral blood blood
19 chr10:89850000-89853200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
20 chr10:89850000-89853400 Enhancers Primary T cells from cord blood blood
21 chr10:89850200-89853400 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr10:89850200-89854200 Enhancers Primary T cells fromperipheralblood blood
23 chr10:89850400-89852800 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr10:89850400-89853400 Enhancers Primary T regulatory cells fromperipheralblood blood
25 chr10:89850400-89854600 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr10:89850600-89852800 Weak transcription Esophagus oesophagus
27 chr10:89850600-89853000 Enhancers NHEK skin
28 chr10:89851000-89853000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr10:89851800-89852800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr10:89851800-89853400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
31 chr10:89851800-89853600 Enhancers Monocytes-CD14+_RO01746 blood
32 chr10:89851800-89857400 Enhancers Dnd41 blood
33 chr10:89852000-89854800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr10:89852200-89855400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr10:89852400-89852600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
36 chr10:89852400-89852600 Enhancers Thymus Thymus
37 chr10:89852400-89853000 Enhancers Skeletal Muscle Female skeletal muscle
38 chr10:89852400-89853400 Enhancers Primary B cells from cord blood blood
39 chr10:89852400-89853400 Enhancers Fetal Heart heart
40 chr10:89852400-89853400 Enhancers Left Ventricle heart
41 chr10:89852400-89853800 Enhancers Adipose Nuclei Adipose
42 chr10:89852400-89853800 Enhancers GM12878-XiMat blood
43 chr10:89852400-89854400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr10:89852400-89855200 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015