Variant report

Variant	rs75739892
Chromosome Location	chr6:44510844-44510845
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44510267..44512106-chr6:44515045..44516562,2	K562	blood:
2	chr6:44504867..44507271-chr6:44510365..44512110,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5283	chr6:44505982-44517131	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv3499026	chr6:44510424-44516522	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv3499029	chr6:44510824-44516422	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44509000-44511200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr6:44509200-44511600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr6:44509400-44511000	Enhancers	H1 Cell Line	embryonic stem cell
4	chr6:44509400-44511000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:44509400-44511000	Enhancers	HSMMtube	muscle
6	chr6:44509400-44511400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr6:44509600-44511000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr6:44509600-44511000	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr6:44509600-44511200	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr6:44509800-44511000	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr6:44509800-44513000	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr6:44510000-44511000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
13	chr6:44510200-44511000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
14	chr6:44510200-44511400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr6:44510200-44511600	Enhancers	Psoas Muscle	Psoas
16	chr6:44510600-44511000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr6:44510600-44511000	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
18	chr6:44510600-44511000	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr6:44510600-44511000	Enhancers	Adipose Nuclei	Adipose
20	chr6:44510600-44511000	Enhancers	Brain Germinal Matrix	brain
21	chr6:44510600-44511000	Enhancers	NH-A	brain
22	chr6:44510600-44511200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr6:44510600-44511200	Enhancers	HUES64 Cell Line	embryonic stem cell
24	chr6:44510600-44511200	Enhancers	Brain Anterior Caudate	brain
25	chr6:44510600-44511400	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr6:44510600-44511600	Enhancers	Ovary	ovary
27	chr6:44510800-44511000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr6:44510800-44511200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr6:44510800-44511200	Enhancers	HUES48 Cell Line	embryonic stem cell

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