Variant report

Variant	rs7576321
Chromosome Location	chr2:234920434-234920435
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1118259	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2052029	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2052030	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2190951	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4664000	0.86[AMR][1000 genomes]
rs4664001	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs585284	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs601129	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs604082	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6431651	0.87[AMR][1000 genomes]
rs6431652	0.86[AMR][1000 genomes]
rs6734618	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013712	chr2:234558457-235495825	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv532476	chr2:234595695-235134381	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:234919000-234923400	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
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