The 2.0 version of rSNPBase

Variant report

Variant rs7577442
Chromosome Location chr2:112881614-112881615
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:112835800-112883200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr2:112856800-112881800 Weak transcription Brain Cingulate Gyrus brain
3 chr2:112857000-112883000 Weak transcription Hela-S3 cervix
4 chr2:112857000-112891200 Weak transcription Small Intestine intestine
5 chr2:112867600-112882600 Weak transcription Fetal Stomach stomach
6 chr2:112869800-112884000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:112869800-112890200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:112870000-112881800 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr2:112870400-112895000 Weak transcription HMEC breast
10 chr2:112870400-112895200 Weak transcription Gastric stomach
11 chr2:112870600-112882000 Weak transcription Esophagus oesophagus
12 chr2:112870600-112882200 Weak transcription NHEK skin
13 chr2:112870600-112882800 Weak transcription Rectal Smooth Muscle rectum
14 chr2:112871200-112881800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr2:112871200-112881800 Weak transcription Brain Hippocampus Middle brain
16 chr2:112871200-112882600 Weak transcription Muscle Satellite Cultured Cells --
17 chr2:112871200-112883200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr2:112874400-112882000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:112874600-112882800 Weak transcription Lung lung
20 chr2:112875600-112891400 Weak transcription HepG2 liver
21 chr2:112875800-112881800 Weak transcription Fetal Muscle Trunk muscle
22 chr2:112875800-112882000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:112876000-112881800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:112876000-112881800 Weak transcription Spleen Spleen
25 chr2:112876000-112882000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:112876000-112882600 Weak transcription Primary B cells from peripheral blood blood
27 chr2:112876000-112882600 Weak transcription Aorta Aorta
28 chr2:112876000-112882800 Weak transcription Primary T cells fromperipheralblood blood
29 chr2:112876000-112883200 Weak transcription Primary T cells from cord blood blood
30 chr2:112876000-112883200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr2:112876000-112883600 Weak transcription Liver Liver
32 chr2:112876000-112890000 Weak transcription Ovary ovary
33 chr2:112876000-112893600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr2:112876000-112895000 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr2:112876000-112895000 Weak transcription Placenta Amnion Placenta Amnion
36 chr2:112876000-112895000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr2:112876200-112890400 Weak transcription K562 blood
38 chr2:112876600-112881800 Weak transcription Adipose Nuclei Adipose
39 chr2:112876600-112882800 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr2:112876600-112886200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:112877000-112882600 Weak transcription Primary monocytes fromperipheralblood blood
42 chr2:112878800-112881800 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr2:112879600-112881800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:112880400-112881800 Weak transcription Fetal Kidney kidney
45 chr2:112880400-112882200 Weak transcription GM12878-XiMat blood
46 chr2:112880400-112882800 Weak transcription NHLF lung
47 chr2:112880400-112883000 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr2:112880400-112883000 Weak transcription HUVEC blood vessel
49 chr2:112880400-112883800 Weak transcription Fetal Lung lung
50 chr2:112880400-112887800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015