The 2.0 version of rSNPBase

Variant report

Variant rs7578402
Chromosome Location chr2:234207477-234207478
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234176800-234207800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:234181400-234216400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:234199200-234210200 Weak transcription Stomach Mucosa stomach
4 chr2:234203200-234209000 Weak transcription Fetal Brain Male brain
5 chr2:234203400-234209800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:234203400-234216000 Weak transcription Hela-S3 cervix
7 chr2:234204000-234211000 Weak transcription Fetal Lung lung
8 chr2:234204600-234207600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr2:234204800-234207800 Weak transcription Primary hematopoietic stem cells blood
10 chr2:234204800-234208800 Weak transcription Placenta Placenta
11 chr2:234204800-234209400 Weak transcription NHLF lung
12 chr2:234204800-234210400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr2:234205000-234207800 Weak transcription Primary B cells from cord blood blood
14 chr2:234205000-234209000 Weak transcription GM12878-XiMat blood
15 chr2:234205000-234216200 Weak transcription Left Ventricle heart
16 chr2:234205200-234207600 Weak transcription Fetal Muscle Trunk muscle
17 chr2:234205200-234207800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr2:234205200-234207800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr2:234205200-234208000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr2:234205200-234208400 Weak transcription Gastric stomach
21 chr2:234205200-234208600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr2:234205200-234209000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:234205200-234209200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:234205200-234210400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr2:234205200-234211600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:234205200-234211800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr2:234205400-234207600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr2:234205400-234207600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:234205400-234207600 Weak transcription Dnd41 blood
30 chr2:234205400-234208000 Weak transcription Primary T cells fromperipheralblood blood
31 chr2:234205400-234208200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:234205400-234208200 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr2:234205400-234209200 Weak transcription Brain Cingulate Gyrus brain
34 chr2:234205400-234209400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr2:234205400-234209600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:234205400-234211800 Weak transcription Stomach Smooth Muscle stomach
37 chr2:234205400-234213400 Weak transcription Lung lung
38 chr2:234205400-234219800 Weak transcription Spleen Spleen
39 chr2:234205600-234207800 Enhancers Rectal Mucosa Donor 31 rectum
40 chr2:234205600-234208000 Weak transcription Fetal Brain Female brain
41 chr2:234205600-234208400 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr2:234205600-234209000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr2:234205800-234207600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr2:234205800-234207800 Enhancers Fetal Intestine Large intestine
45 chr2:234206000-234207600 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr2:234206000-234207600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr2:234206000-234207600 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr2:234206000-234207800 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr2:234206000-234208800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr2:234206000-234214800 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015