Variant report

Variant rs7580131
Chromosome Location chr2:33546609-33546610
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33492400-33547400 Weak transcription Fetal Intestine Small intestine
2 chr2:33523800-33550600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:33529800-33561000 Weak transcription HUVEC blood vessel
4 chr2:33529800-33609400 Weak transcription Right Ventricle heart
5 chr2:33540800-33580800 Weak transcription Placenta Placenta
6 chr2:33541000-33547000 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr2:33541200-33547200 Weak transcription Gastric stomach
8 chr2:33542000-33572200 Weak transcription Liver Liver
9 chr2:33543000-33547000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr2:33543000-33547200 Weak transcription Lung lung
11 chr2:33544600-33547400 Enhancers Ovary ovary
12 chr2:33544800-33547200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:33544800-33548400 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr2:33545000-33547200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:33545000-33547600 Enhancers Fetal Heart heart
16 chr2:33545200-33546800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:33545200-33549600 Weak transcription Brain Substantia Nigra brain
18 chr2:33545400-33547800 Enhancers Adipose Nuclei Adipose
19 chr2:33545400-33548400 Enhancers Fetal Stomach stomach
20 chr2:33545400-33551800 Weak transcription Right Atrium heart
21 chr2:33545600-33547600 Enhancers Fetal Muscle Leg muscle
22 chr2:33545600-33547800 Enhancers Skeletal Muscle Male skeletal muscle
23 chr2:33545600-33547800 Enhancers HSMMtube muscle
24 chr2:33545600-33548200 Enhancers NHLF lung
25 chr2:33545800-33547800 Enhancers Fetal Lung lung
26 chr2:33545800-33548200 Enhancers Colon Smooth Muscle Colon
27 chr2:33545800-33548200 Enhancers Rectal Smooth Muscle rectum
28 chr2:33545800-33548400 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr2:33545800-33549200 Enhancers Dnd41 blood
30 chr2:33546000-33546800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
31 chr2:33546200-33547200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr2:33546200-33547200 Enhancers HMEC breast
33 chr2:33546200-33547200 Enhancers NH-A brain
34 chr2:33546200-33548400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr2:33546400-33546800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
36 chr2:33546400-33546800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:33546400-33546800 Enhancers A549 lung
38 chr2:33546400-33546800 Flanking Active TSS GM12878-XiMat blood
39 chr2:33546400-33547000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:33546400-33547200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr2:33546400-33547400 Enhancers Aorta Aorta
42 chr2:33546400-33547400 Flanking Active TSS Osteobl bone
43 chr2:33546400-33547600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr2:33546400-33547800 Enhancers Skeletal Muscle Female skeletal muscle
45 chr2:33546400-33547800 Enhancers HSMM muscle
46 chr2:33546600-33546800 Enhancers Left Ventricle heart
47 chr2:33546600-33546800 Enhancers Rectal Mucosa Donor 29 rectum
48 chr2:33546600-33546800 Enhancers Spleen Spleen
49 chr2:33546600-33546800 Active TSS NHDF-Ad bronchial
50 chr2:33546600-33547000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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