Variant report

Variant	rs7581158
Chromosome Location	chr2:37424971-37424972
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr2:37422936-37425300	HepG2	liver:	n/a	n/a
2	POLR2A	chr2:37424864-37425043	MCF-7	breast:	n/a	n/a
3	POLR2A	chr2:37424691-37426324	SK-N-MC	brain:	n/a	n/a
4	MXI1	chr2:37423035-37424989	SK-N-SH	brain:	n/a	n/a

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:37424938..37427231-chr2:37439674..37442605,2	K562	blood:
2	chr2:37382658..37387385-chr2:37421093..37425812,6	MCF-7	breast:
3	chr2:37424349..37426736-chr2:37447121..37449213,2	K562	blood:
4	chr2:37420975..37425403-chr2:37457376..37460314,8	K562	blood:
5	chr2:37422039..37425278-chr2:37456815..37459935,9	MCF-7	breast:
6	chr2:37423198..37425602-chr2:37457469..37460195,6	K562	blood:
7	chr2:37423528..37425114-chr2:37439961..37442863,2	MCF-7	breast:
8	chr2:37375443..37378209-chr2:37422439..37424991,2	MCF-7	breast:
9	chr2:37424470..37426028-chr2:37473797..37476717,2	K562	blood:
10	chr2:37381640..37387428-chr2:37421417..37425727,6	MCF-7	breast:
11	chr2:37422594..37426591-chr2:37455893..37460210,5	MCF-7	breast:
12	chr2:37420171..37423121-chr2:37423446..37425110,2	K562	blood:

No data

Variant related genes	Relation type
SULT6B1	TF binding region
ENSG00000233159	TF binding region
ENSG00000115816	Chromatin interaction
ENSG00000224891	Chromatin interaction
ENSG00000055332	Chromatin interaction
ENSG00000003509	Chromatin interaction
ENSG00000233159	Chromatin interaction
ENSG00000218739	Chromatin interaction

rs_ID	r²[population]
rs4648246	1.00[AMR][1000 genomes]

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37418600-37427200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr2:37423000-37425400	Active TSS	iPS-15b Cell Line	embryonic stem cell
3	chr2:37423200-37425400	Active TSS	HUES48 Cell Line	embryonic stem cell
4	chr2:37423200-37425400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr2:37423200-37425600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr2:37423400-37425400	Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr2:37423400-37425600	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr2:37423400-37425600	Active TSS	GM12878-XiMat	blood
9	chr2:37423600-37425600	Active TSS	HUES6 Cell Line	embryonic stem cell
10	chr2:37423800-37425200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
11	chr2:37424000-37425000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr2:37424200-37425000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr2:37424200-37425000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
14	chr2:37424200-37425000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
15	chr2:37424200-37425000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr2:37424200-37425000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
17	chr2:37424400-37425000	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr2:37424400-37425000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr2:37424400-37425000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr2:37424400-37425000	Flanking Active TSS	Rectal Smooth Muscle	rectum
21	chr2:37424400-37425000	Flanking Active TSS	Dnd41	blood
22	chr2:37424400-37425200	Enhancers	Pancreas	Pancrea
23	chr2:37424400-37425200	Enhancers	Spleen	Spleen
24	chr2:37424400-37427600	Weak transcription	Lung	lung
25	chr2:37424400-37430800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr2:37424400-37433200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr2:37424400-37446400	Weak transcription	Small Intestine	intestine
28	chr2:37424600-37425000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr2:37424600-37425000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
30	chr2:37424600-37425000	Enhancers	Primary monocytes fromperipheralblood	blood
31	chr2:37424600-37425000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr2:37424600-37425000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr2:37424600-37425000	Enhancers	Duodenum Smooth Muscle	Duodenum
34	chr2:37424600-37425000	Enhancers	Rectal Mucosa Donor 31	rectum
35	chr2:37424600-37425000	Flanking Active TSS	Stomach Smooth Muscle	stomach
36	chr2:37424600-37425000	Flanking Active TSS	HepG2	liver
37	chr2:37424600-37425000	Enhancers	Monocytes-CD14+_RO01746	blood
38	chr2:37424600-37425000	Active TSS	NHLF	lung
39	chr2:37424600-37425200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr2:37424600-37425200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr2:37424600-37425200	Flanking Active TSS	Colonic Mucosa	Colon
42	chr2:37424600-37425200	Enhancers	Left Ventricle	heart
43	chr2:37424600-37425200	Enhancers	Psoas Muscle	Psoas
44	chr2:37424600-37425200	Enhancers	Sigmoid Colon	Sigmoid Colon
45	chr2:37424600-37425200	Enhancers	Skeletal Muscle Female	skeletal muscle
46	chr2:37424600-37425200	Enhancers	Stomach Mucosa	stomach
47	chr2:37424600-37425600	Enhancers	Cortex derived primary cultured neurospheres	brain
48	chr2:37424600-37425600	Enhancers	Fetal Muscle Leg	muscle
49	chr2:37424600-37425800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr2:37424600-37425800	Enhancers	Primary B cells from cord blood	blood

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