Variant report

Variant	rs75836399
Chromosome Location	chr6:113885495-113885496
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	esv3344043	chr6:113884509-113886407	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113876600-113885600	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr6:113877600-113885600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr6:113878800-113885600	Weak transcription	Fetal Intestine Small	intestine
4	chr6:113879600-113885600	Weak transcription	Stomach Smooth Muscle	stomach
5	chr6:113879800-113885600	Weak transcription	Fetal Brain Female	brain
6	chr6:113880000-113885800	Weak transcription	Fetal Muscle Trunk	muscle
7	chr6:113880400-113885600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr6:113880400-113885600	Weak transcription	Ovary	ovary
9	chr6:113880600-113885600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr6:113880600-113885600	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr6:113880600-113885800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr6:113880800-113885600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr6:113880800-113885600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr6:113880800-113885600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr6:113880800-113885600	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr6:113880800-113885600	Weak transcription	Rectal Smooth Muscle	rectum
17	chr6:113881000-113885600	Weak transcription	Colon Smooth Muscle	Colon
18	chr6:113881200-113885600	Weak transcription	Fetal Lung	lung
19	chr6:113882000-113885600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr6:113882400-113885600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr6:113882600-113885600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr6:113882800-113885800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr6:113883000-113885600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr6:113883000-113885600	Weak transcription	HSMMtube	muscle
25	chr6:113883000-113885600	Weak transcription	HUVEC	blood vessel
26	chr6:113883200-113885600	Weak transcription	HMEC	breast
27	chr6:113884200-113885600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr6:113884200-113885600	Weak transcription	GM12878-XiMat	blood
29	chr6:113884400-113885600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
30	chr6:113884400-113885600	Weak transcription	Pancreatic Islets	Pancreatic Islet
31	chr6:113884400-113885600	Enhancers	NHLF	lung
32	chr6:113884400-113885800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr6:113884400-113885800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr6:113884400-113886000	Enhancers	Fetal Muscle Leg	muscle
35	chr6:113884600-113885600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr6:113884600-113885600	Weak transcription	NH-A	brain
37	chr6:113884600-113885800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr6:113885000-113885600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr6:113885000-113885600	Enhancers	Fetal Stomach	stomach
40	chr6:113885000-113886400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr6:113885400-113885600	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr6:113885400-113885600	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr6:113885400-113885600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr6:113885400-113885600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr6:113885400-113885600	Enhancers	Muscle Satellite Cultured Cells	--
46	chr6:113885400-113885600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr6:113885400-113885600	Enhancers	Adipose Nuclei	Adipose
48	chr6:113885400-113885600	Enhancers	Brain Angular Gyrus	brain
49	chr6:113885400-113885600	Enhancers	Brain Cingulate Gyrus	brain
50	chr6:113885400-113885600	Enhancers	Brain Hippocampus Middle	brain

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