The 2.0 version of rSNPBase

Variant report

Variant rs7584474
Chromosome Location chr2:53902011-53902012
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53874200-53935000 Weak transcription Pancreas Pancrea
2 chr2:53881400-53934400 Weak transcription Stomach Smooth Muscle stomach
3 chr2:53885600-53925000 Weak transcription Fetal Intestine Small intestine
4 chr2:53885800-53911800 Weak transcription Adipose Nuclei Adipose
5 chr2:53888200-53934200 Weak transcription Lung lung
6 chr2:53888400-53935200 Weak transcription Fetal Brain Male brain
7 chr2:53888600-53935200 Weak transcription Hela-S3 cervix
8 chr2:53889000-53935800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr2:53892600-53902600 Weak transcription Rectal Smooth Muscle rectum
10 chr2:53892600-53918800 Weak transcription Left Ventricle heart
11 chr2:53893400-53915200 Weak transcription Ovary ovary
12 chr2:53893800-53926800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:53894200-53920800 Weak transcription Duodenum Mucosa Duodenum
14 chr2:53894400-53912200 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr2:53894400-53914400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr2:53894400-53925000 Weak transcription Fetal Muscle Trunk muscle
17 chr2:53894400-53933800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr2:53894600-53911200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr2:53895000-53911800 Weak transcription Primary T cells fromperipheralblood blood
20 chr2:53895400-53919000 Weak transcription Fetal Intestine Large intestine
21 chr2:53895400-53921200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr2:53895400-53925800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr2:53895400-53926200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr2:53895600-53914800 Weak transcription Primary monocytes fromperipheralblood blood
25 chr2:53895600-53921400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr2:53895800-53916800 Weak transcription Brain Anterior Caudate brain
27 chr2:53895800-53926200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr2:53896000-53913000 Weak transcription Fetal Muscle Leg muscle
29 chr2:53896000-53918800 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr2:53896200-53911200 Weak transcription Liver Liver
31 chr2:53896200-53918400 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr2:53896400-53926000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr2:53896800-53910200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr2:53896800-53910800 Weak transcription Primary B cells from peripheral blood blood
35 chr2:53896800-53918800 Weak transcription Fetal Brain Female brain
36 chr2:53896800-53924800 Weak transcription Thymus Thymus
37 chr2:53896800-53936600 Weak transcription Aorta Aorta
38 chr2:53897000-53910400 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr2:53897000-53911400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr2:53897400-53910200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr2:53897400-53910200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:53897400-53912000 Weak transcription Primary hematopoietic stem cells blood
43 chr2:53897600-53911600 Weak transcription Dnd41 blood
44 chr2:53897800-53910800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:53897800-53911000 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr2:53897800-53911600 Weak transcription Fetal Thymus thymus
47 chr2:53898000-53910200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:53898000-53910200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr2:53898000-53914800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr2:53898000-53918800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015