The 2.0 version of rSNPBase

Variant report

Variant rs7585974
Chromosome Location chr2:172377212-172377213
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172367000-172378000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:172370800-172378400 Weak transcription Right Ventricle heart
3 chr2:172373000-172378000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr2:172373200-172378200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr2:172373200-172378200 Weak transcription Osteobl bone
6 chr2:172373400-172377600 Weak transcription H1 Cell Line embryonic stem cell
7 chr2:172373400-172378000 Weak transcription Muscle Satellite Cultured Cells --
8 chr2:172373400-172378000 Weak transcription HSMM muscle
9 chr2:172373600-172377800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr2:172373600-172377800 Weak transcription NHDF-Ad bronchial
11 chr2:172373600-172378000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr2:172373600-172378200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr2:172373600-172378200 Weak transcription NH-A brain
14 chr2:172373600-172378400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:172373600-172378800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:172373800-172377800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr2:172374400-172378400 Weak transcription Placenta Placenta
18 chr2:172375800-172377800 Enhancers HSMMtube muscle
19 chr2:172375800-172377800 Enhancers K562 blood
20 chr2:172375800-172378000 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr2:172375800-172378000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:172376200-172378000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:172376200-172378000 Enhancers GM12878-XiMat blood
24 chr2:172376400-172378400 Enhancers Fetal Muscle Leg muscle
25 chr2:172376400-172378400 Enhancers Left Ventricle heart
26 chr2:172376600-172377400 Enhancers Brain Cingulate Gyrus brain
27 chr2:172376600-172378000 Enhancers Brain Hippocampus Middle brain
28 chr2:172376600-172378400 Enhancers Cortex derived primary cultured neurospheres brain
29 chr2:172376600-172378400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
30 chr2:172376800-172377400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr2:172376800-172377600 Enhancers Brain Substantia Nigra brain
32 chr2:172376800-172378000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr2:172376800-172378000 Weak transcription Ovary ovary
34 chr2:172376800-172378200 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr2:172376800-172378200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr2:172377000-172377400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr2:172377000-172378200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr2:172377000-172378400 Enhancers Fetal Thymus thymus
39 chr2:172377200-172378200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr2:172377200-172378200 Weak transcription Right Atrium heart
41 chr2:172377200-172378400 Enhancers Brain Anterior Caudate brain

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Last update: Aug 31, 2015