Variant report

Variant	rs7591834
Chromosome Location	chr2:187348307-187348308
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:187331928..187334444-chr2:187348052..187350692,2	MCF-7	breast:
2	chr2:187347068..187348940-chr2:187349193..187350808,2	MCF-7	breast:
3	chr2:187347420..187348961-chr2:187351951..187353598,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000065548	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757844	chr2:187332780-187580547	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	esv2759107	chr2:187332780-187580547	Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:187328000-187350400	Weak transcription	Pancreas	Pancrea
2	chr2:187339800-187348400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr2:187339800-187349800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr2:187346400-187348600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr2:187346400-187348600	Weak transcription	HMEC	breast
6	chr2:187346400-187349200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr2:187346600-187350000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr2:187347000-187348400	Enhancers	HepG2	liver
9	chr2:187347400-187348400	Enhancers	Rectal Mucosa Donor 31	rectum
10	chr2:187348000-187348400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr2:187348000-187348600	Flanking Active TSS	Fetal Intestine Large	intestine
12	chr2:187348000-187349000	Flanking Active TSS	GM12878-XiMat	blood
13	chr2:187348000-187349400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr2:187348200-187348400	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr2:187348200-187348400	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr2:187348200-187348600	Flanking Active TSS	Fetal Intestine Small	intestine
17	chr2:187348200-187348600	Enhancers	Ovary	ovary
18	chr2:187348200-187348800	Enhancers	Primary hematopoietic stem cells	blood
19	chr2:187348200-187348800	Weak transcription	Fetal Kidney	kidney
20	chr2:187348200-187348800	Enhancers	Dnd41	blood
21	chr2:187348200-187348800	Flanking Active TSS	K562	blood
22	chr2:187348200-187348800	Enhancers	NHEK	skin
23	chr2:187348200-187349000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr2:187348200-187349000	Enhancers	Primary T helper cells PMA-I stimulated	--
25	chr2:187348200-187349400	Active TSS	Rectal Smooth Muscle	rectum
26	chr2:187348200-187350000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
27	chr2:187348200-187350000	Active TSS	Duodenum Mucosa	Duodenum
28	chr2:187348200-187352200	Active TSS	Colonic Mucosa	Colon
29	chr2:187348200-187353400	Active TSS	Rectal Mucosa Donor 29	rectum

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