Variant report

Variant	rs7599846
Chromosome Location	chr2:182063698-182063699
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431824	chr2:181946115-182118559	ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1005870	chr2:181968637-182921439	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv536063	chr2:181968637-182921439	Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
4	esv1010652	chr2:182062142-182065110	Enhancers Weak transcription Flanking Active TSS Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182056600-182068000	Weak transcription	HSMMtube	muscle
2	chr2:182059800-182064400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
3	chr2:182060000-182064400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
4	chr2:182060200-182064800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr2:182060400-182064000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
6	chr2:182061000-182064000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
7	chr2:182061000-182064800	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr2:182061000-182065800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr2:182061200-182064400	Enhancers	Primary T cells from cord blood	blood
10	chr2:182061400-182063800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr2:182061800-182064000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr2:182061800-182064000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr2:182062000-182063800	Enhancers	Primary hematopoietic stem cells	blood
14	chr2:182063200-182067000	Weak transcription	HSMM	muscle
15	chr2:182063400-182064000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
16	chr2:182063400-182064800	Enhancers	Primary T cells fromperipheralblood	blood
17	chr2:182063400-182068800	Weak transcription	Dnd41	blood
18	chr2:182063600-182064200	Enhancers	Primary T helper naive cells from peripheral blood	blood
19	chr2:182063600-182065000	Enhancers	Primary T killer memory cells from peripheral blood	blood
20	chr2:182063600-182065800	Enhancers	Primary T helper cells PMA-I stimulated	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links