Variant report

Variant	rs7605304
Chromosome Location	chr2:21445569-21445570
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:21020725..21022503-chr2:21444417..21447318,2	K562	blood:
2	chr2:21444986..21447643-chr2:21451279..21452884,2	K562	blood:
3	chr2:21444080..21447303-chr2:21449844..21452884,4	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs1079457	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11694766	0.91[ASN][1000 genomes]
rs11900894	0.99[ASN][1000 genomes]
rs13412147	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13420469	0.99[ASN][1000 genomes]
rs3106202	0.97[ASN][1000 genomes]
rs364381	0.97[ASN][1000 genomes]
rs364390	0.97[ASN][1000 genomes]
rs368523	0.97[ASN][1000 genomes]
rs377157	0.95[ASN][1000 genomes]
rs384429	0.97[ASN][1000 genomes]
rs393495	0.97[ASN][1000 genomes]
rs398532	0.96[ASN][1000 genomes]
rs401211	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs403772	0.97[ASN][1000 genomes]
rs405983	0.96[ASN][1000 genomes]
rs411617	0.97[ASN][1000 genomes]
rs412255	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs414611	0.97[ASN][1000 genomes]
rs416490	0.97[ASN][1000 genomes]
rs425953	0.95[ASN][1000 genomes]
rs426353	0.97[ASN][1000 genomes]
rs427075	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs427095	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs427642	0.97[ASN][1000 genomes]
rs430872	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs431802	0.97[ASN][1000 genomes]
rs434540	0.97[ASN][1000 genomes]
rs435647	0.96[ASN][1000 genomes]
rs436941	0.97[ASN][1000 genomes]
rs437362	0.96[ASN][1000 genomes]
rs437624	0.97[ASN][1000 genomes]
rs437775	0.97[ASN][1000 genomes]
rs452502	0.97[ASN][1000 genomes]
rs454826	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs540698	0.85[ASN][1000 genomes]
rs549973	0.93[ASN][1000 genomes]
rs949790	0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873728	chr2:21250914-21460786	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs7605304	RHOB	cis	cerebellum	SCAN
rs7605304	TMEM14E	trans	cerebellum	SCAN
rs7605304	NLRP9	trans	cerebellum	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21443400-21446400	Active TSS	Aorta	Aorta
2	chr2:21445000-21445600	Active TSS	NHEK	skin
3	chr2:21445400-21445600	Enhancers	Right Atrium	heart
4	chr2:21445400-21445600	Enhancers	Spleen	Spleen

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