Variant report

Variant	rs76110316
Chromosome Location	chr12:4688858-4688859
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv557123	chr12:4436632-4736569	Transcr. at gene 5' and 3' Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv1038332	chr12:4627992-4689300	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv541362	chr12:4627992-4689300	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
4	nsv832318	chr12:4655799-4875837	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
5	nsv522586	chr12:4688634-4691682	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:4673400-4692200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:4682800-4699600	Weak transcription	Primary B cells from cord blood	blood
3	chr12:4687800-4690200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr12:4687800-4690600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:4688400-4689600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr12:4688400-4689600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr12:4688600-4689000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr12:4688600-4689400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr12:4688600-4689800	Enhancers	Fetal Muscle Leg	muscle
10	chr12:4688600-4690200	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr12:4688600-4690200	Enhancers	HUVEC	blood vessel
12	chr12:4688600-4690400	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr12:4688600-4691000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr12:4688800-4689000	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr12:4688800-4689400	Enhancers	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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