| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1013433 |
chr1:152619305-153262215 |
Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
46 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv535170 |
chr1:152619305-153262215 |
Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
46 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1001834 |
chr1:152648853-153279143 |
Enhancers Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
44 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv547899 |
chr1:152672005-153245082 |
Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
42 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1010488 |
chr1:152901263-153670972 |
Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
236 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv535171 |
chr1:152901263-153670972 |
Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
236 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv533877 |
chr1:152923645-153468131 |
Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
56 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1004168 |
chr1:153088209-153226033 |
ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1013041 |
chr1:153105260-153223716 |
Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv1003014 |
chr1:153209833-153263691 |
Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv535172 |
chr1:153209833-153263691 |
Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
