Variant report

Variant rs7619906
Chromosome Location chr3:195587099-195587100
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195573200-195590000 Weak transcription Thymus Thymus
2 chr3:195576400-195589800 Weak transcription Gastric stomach
3 chr3:195578200-195592800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr3:195578400-195590200 Weak transcription HSMM muscle
5 chr3:195578400-195604800 Weak transcription GM12878-XiMat blood
6 chr3:195581200-195596400 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr3:195581200-195597200 Weak transcription H9 Cell Line embryonic stem cell
8 chr3:195581800-195590200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:195582200-195590400 Weak transcription Fetal Brain Female brain
10 chr3:195583000-195590400 Weak transcription Lung lung
11 chr3:195585800-195587600 Enhancers Liver Liver
12 chr3:195585800-195587800 Enhancers Primary hematopoietic stem cells blood
13 chr3:195585800-195588800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr3:195586000-195587200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr3:195586000-195587200 Enhancers iPS-20b Cell Line embryonic stem cell
16 chr3:195586000-195587200 Enhancers Cortex derived primary cultured neurospheres brain
17 chr3:195586000-195587200 Enhancers Brain Germinal Matrix brain
18 chr3:195586000-195587200 Bivalent Enhancer Fetal Muscle Trunk muscle
19 chr3:195586000-195587400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr3:195586000-195587400 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr3:195586000-195587400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr3:195586000-195587400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr3:195586000-195587600 Enhancers ES-WA7 Cell Line embryonic stem cell
24 chr3:195586200-195587600 Enhancers NHEK skin
25 chr3:195586400-195587200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
26 chr3:195586400-195587200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr3:195586400-195587200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
28 chr3:195586400-195587200 Enhancers Brain Angular Gyrus brain
29 chr3:195586400-195587200 Enhancers Fetal Thymus thymus
30 chr3:195586400-195587400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr3:195586400-195587400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr3:195586400-195587400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr3:195586400-195587800 Enhancers Brain Cingulate Gyrus brain
34 chr3:195586400-195590200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr3:195586600-195587400 Enhancers HUES6 Cell Line embryonic stem cell
36 chr3:195586600-195587400 Enhancers Esophagus oesophagus
37 chr3:195586600-195589000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr3:195586600-195589800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr3:195586600-195589800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr3:195586600-195589800 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr3:195586600-195589800 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr3:195586600-195589800 Weak transcription Muscle Satellite Cultured Cells --
43 chr3:195586600-195589800 Weak transcription Colon Smooth Muscle Colon
44 chr3:195586600-195589800 Weak transcription Duodenum Mucosa Duodenum
45 chr3:195586600-195590200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr3:195586600-195590200 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:195586600-195590200 Weak transcription Hela-S3 cervix
48 chr3:195586600-195590400 Weak transcription Right Atrium heart
49 chr3:195586600-195590400 Weak transcription Right Ventricle heart
50 chr3:195586600-195590400 Weak transcription Spleen Spleen

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