Variant report

Variant	rs76214260
Chromosome Location	chr6:119381462-119381463
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030400	chr6:119320153-119433830	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA	30 gene(s)	inside rSNPs	diseases
2	nsv528632	chr6:119380885-119397860	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:119375000-119382000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr6:119378200-119388400	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr6:119380800-119383000	Genic enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:119380800-119384400	Weak transcription	Fetal Lung	lung
5	chr6:119381200-119382600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr6:119381200-119383000	Enhancers	K562	blood
7	chr6:119381400-119381600	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr6:119381400-119382000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr6:119381400-119382000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr6:119381400-119382200	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr6:119381400-119382400	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr6:119381400-119382400	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr6:119381400-119382400	Enhancers	iPS-18 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links