Variant report

Variant rs7623559
Chromosome Location chr3:195586341-195586342
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195573200-195590000 Weak transcription Thymus Thymus
2 chr3:195576400-195589800 Weak transcription Gastric stomach
3 chr3:195578200-195592800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr3:195578400-195586400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:195578400-195586400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr3:195578400-195586400 Weak transcription Fetal Heart heart
7 chr3:195578400-195586400 Weak transcription Right Atrium heart
8 chr3:195578400-195590200 Weak transcription HSMM muscle
9 chr3:195578400-195604800 Weak transcription GM12878-XiMat blood
10 chr3:195581200-195586400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr3:195581200-195586400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr3:195581200-195586400 Weak transcription Dnd41 blood
13 chr3:195581200-195586600 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr3:195581200-195596400 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr3:195581200-195597200 Weak transcription H9 Cell Line embryonic stem cell
16 chr3:195581800-195590200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr3:195582200-195590400 Weak transcription Fetal Brain Female brain
18 chr3:195582400-195586400 Weak transcription Spleen Spleen
19 chr3:195583000-195590400 Weak transcription Lung lung
20 chr3:195584000-195586400 Weak transcription Fetal Thymus thymus
21 chr3:195584200-195586600 Weak transcription H1 Cell Line embryonic stem cell
22 chr3:195585600-195586400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr3:195585800-195586400 Enhancers K562 blood
24 chr3:195585800-195587600 Enhancers Liver Liver
25 chr3:195585800-195587800 Enhancers Primary hematopoietic stem cells blood
26 chr3:195585800-195588800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr3:195586000-195586400 Active TSS HUES64 Cell Line embryonic stem cell
28 chr3:195586000-195586400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr3:195586000-195586400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr3:195586000-195586400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr3:195586000-195586400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr3:195586000-195586400 Enhancers Brain Hippocampus Middle brain
33 chr3:195586000-195586400 Enhancers Brain Inferior Temporal Lobe brain
34 chr3:195586000-195586400 Enhancers HMEC breast
35 chr3:195586000-195586600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr3:195586000-195586600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr3:195586000-195586600 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr3:195586000-195586600 Enhancers Colon Smooth Muscle Colon
39 chr3:195586000-195586600 Enhancers Duodenum Mucosa Duodenum
40 chr3:195586000-195586600 Enhancers Fetal Intestine Large intestine
41 chr3:195586000-195586600 Enhancers Placenta Placenta
42 chr3:195586000-195586600 Flanking Active TSS Hela-S3 cervix
43 chr3:195586000-195586800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr3:195586000-195586800 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr3:195586000-195586800 Enhancers Adipose Nuclei Adipose
46 chr3:195586000-195586800 Enhancers Skeletal Muscle Male skeletal muscle
47 chr3:195586000-195586800 Flanking Active TSS Stomach Smooth Muscle stomach
48 chr3:195586000-195587000 Enhancers Primary T helper cells PMA-I stimulated --
49 chr3:195586000-195587200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr3:195586000-195587200 Enhancers iPS-20b Cell Line embryonic stem cell

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