Variant report

Variant	rs7632403
Chromosome Location	chr3:155978696-155978697
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs13082914	1.00[CEU][hapmap]
rs13083584	1.00[CEU][hapmap]
rs1814218	0.84[ASN][1000 genomes]
rs4143532	1.00[CEU][hapmap]
rs4143533	0.85[CEU][hapmap]
rs4680253	0.84[ASN][1000 genomes]
rs58218495	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1014755	chr3:155889430-156411894	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155977400-155978800	Enhancers	Rectal Smooth Muscle	rectum
2	chr3:155977400-155978800	Enhancers	HUVEC	blood vessel
3	chr3:155977600-155978800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr3:155978000-155978800	Enhancers	Colon Smooth Muscle	Colon
5	chr3:155978400-155979000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr3:155978400-155979000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr3:155978400-155979400	Enhancers	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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