Variant report

Variant	rs76341354
Chromosome Location	chr5:94619238-94619239
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3341897	chr5:94618421-94620969	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
3	esv3408932	chr5:94619021-94621569	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:87 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94618400-94620000	Enhancers	Fetal Brain Male	brain
2	chr5:94618400-94621200	Active TSS	Brain Inferior Temporal Lobe	brain
3	chr5:94618600-94621600	Active TSS	Brain Angular Gyrus	brain
4	chr5:94618800-94619400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
5	chr5:94618800-94619600	Active TSS	Right Ventricle	heart
6	chr5:94618800-94620600	Bivalent/Poised TSS	Brain Hippocampus Middle	brain
7	chr5:94618800-94620600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
8	chr5:94618800-94620800	Active TSS	H9 Cell Line	embryonic stem cell
9	chr5:94618800-94620800	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr5:94618800-94620800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
11	chr5:94619000-94619400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr5:94619000-94619400	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr5:94619000-94619400	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr5:94619000-94619400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
15	chr5:94619000-94619400	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
16	chr5:94619000-94619400	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
17	chr5:94619000-94619400	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr5:94619000-94619400	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr5:94619000-94619400	Bivalent Enhancer	Fetal Heart	heart
20	chr5:94619000-94619400	Flanking Bivalent TSS/Enh	Fetal Intestine Small	intestine
21	chr5:94619000-94619400	Bivalent Enhancer	Small Intestine	intestine
22	chr5:94619000-94619400	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
23	chr5:94619000-94619400	Bivalent Enhancer	A549	lung
24	chr5:94619000-94619400	Flanking Bivalent TSS/Enh	HUVEC	blood vessel
25	chr5:94619000-94619600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
26	chr5:94619000-94619600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
27	chr5:94619000-94619600	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
28	chr5:94619000-94619600	Bivalent Enhancer	Liver	Liver
29	chr5:94619000-94619600	Bivalent Enhancer	Esophagus	oesophagus
30	chr5:94619000-94619600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
31	chr5:94619000-94619600	Bivalent Enhancer	Fetal Stomach	stomach
32	chr5:94619000-94619600	Bivalent Enhancer	Fetal Thymus	thymus
33	chr5:94619000-94619600	Enhancers	Gastric	stomach
34	chr5:94619000-94619600	Bivalent/Poised TSS	Monocytes-CD14+_RO01746	blood
35	chr5:94619000-94619600	Bivalent Enhancer	NH-A	brain
36	chr5:94619000-94620600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr5:94619000-94620800	Bivalent/Poised TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr5:94619000-94620800	Bivalent/Poised TSS	NHDF-Ad	bronchial
39	chr5:94619000-94621200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
40	chr5:94619000-94621400	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
41	chr5:94619000-94621400	Active TSS	Pancreatic Islets	Pancreatic Islet
42	chr5:94619200-94619400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr5:94619200-94619400	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr5:94619200-94619400	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
45	chr5:94619200-94619400	Flanking Bivalent TSS/Enh	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr5:94619200-94619400	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
47	chr5:94619200-94619400	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
48	chr5:94619200-94619400	Flanking Active TSS	Primary hematopoietic stem cells	blood
49	chr5:94619200-94619400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr5:94619200-94619400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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