Variant report

Variant	rs7666210
Chromosome Location	chr4:47349894-47349895
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10018303	1.00[AMR][1000 genomes]
rs28513876	1.00[AMR][1000 genomes]
rs28584240	1.00[AMR][1000 genomes]
rs4495013	0.88[YRI][hapmap]
rs4627835	0.80[YRI][hapmap]
rs57843833	1.00[AMR][1000 genomes]
rs6284	0.80[YRI][hapmap]
rs6829199	1.00[AMR][1000 genomes]
rs73813533	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998919	chr4:47207023-47476876	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:47347800-47351000	Enhancers	Muscle Satellite Cultured Cells	--
2	chr4:47349600-47350800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr4:47349600-47350800	Weak transcription	HSMM	muscle
4	chr4:47349600-47350800	Weak transcription	NH-A	brain
5	chr4:47349600-47350800	Weak transcription	Osteobl	bone
6	chr4:47349600-47351200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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