The 2.0 version of rSNPBase

Variant report

Variant rs76693887
Chromosome Location chr5:115865363-115865364
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115828200-115865400 Weak transcription Primary T cells from cord blood blood
2 chr5:115845800-115867200 Weak transcription Right Ventricle heart
3 chr5:115857400-115865400 Weak transcription Ovary ovary
4 chr5:115858200-115867000 Enhancers HUES64 Cell Line embryonic stem cell
5 chr5:115858400-115873600 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr5:115859400-115870000 Weak transcription Fetal Muscle Trunk muscle
7 chr5:115860000-115865400 Enhancers HUES6 Cell Line embryonic stem cell
8 chr5:115860000-115869600 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr5:115860000-115872000 Enhancers HUES48 Cell Line embryonic stem cell
10 chr5:115860000-115872200 Enhancers HepG2 liver
11 chr5:115860200-115867000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr5:115860600-115865600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr5:115861000-115870400 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr5:115861200-115865600 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr5:115861600-115867000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr5:115863200-115865800 Enhancers Fetal Lung lung
17 chr5:115863400-115865600 Enhancers Fetal Stomach stomach
18 chr5:115863400-115865800 Enhancers H1 Cell Line embryonic stem cell
19 chr5:115863600-115867000 Enhancers Cortex derived primary cultured neurospheres brain
20 chr5:115863800-115865600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr5:115864000-115865600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr5:115864000-115865800 Enhancers Small Intestine intestine
23 chr5:115864000-115866000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
24 chr5:115864000-115866000 Enhancers Fetal Muscle Leg muscle
25 chr5:115864000-115866200 Enhancers Fetal Kidney kidney
26 chr5:115864000-115867200 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr5:115864400-115865600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr5:115864400-115867000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr5:115864400-115867000 Weak transcription Lung lung
30 chr5:115864400-115870200 Weak transcription Left Ventricle heart
31 chr5:115864600-115865400 Enhancers Rectal Mucosa Donor 31 rectum
32 chr5:115864600-115866400 Enhancers Duodenum Smooth Muscle Duodenum
33 chr5:115864600-115867000 Weak transcription Psoas Muscle Psoas
34 chr5:115864600-115867000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr5:115864600-115867400 Weak transcription Pancreas Pancrea
36 chr5:115864600-115867600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr5:115864600-115869400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr5:115864600-115869400 Weak transcription Colonic Mucosa Colon
39 chr5:115864600-115869600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr5:115864600-115870000 Weak transcription Adipose Nuclei Adipose
41 chr5:115864600-115870800 Enhancers Fetal Intestine Large intestine
42 chr5:115864600-115871600 Enhancers Fetal Intestine Small intestine
43 chr5:115864600-115872200 Weak transcription Fetal Brain Male brain
44 chr5:115864800-115865400 Weak transcription Rectal Smooth Muscle rectum
45 chr5:115864800-115865600 Enhancers Brain Cingulate Gyrus brain
46 chr5:115864800-115865600 Enhancers Brain Germinal Matrix brain
47 chr5:115864800-115865800 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr5:115864800-115866000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr5:115864800-115866000 Enhancers Brain Anterior Caudate brain
50 chr5:115864800-115866200 Enhancers Brain Angular Gyrus brain

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Last update: Aug 31, 2015