Variant report

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs11725464	0.91[ASN][1000 genomes]
rs11730057	0.91[ASN][1000 genomes]
rs11734056	0.91[ASN][1000 genomes]
rs11737648	0.91[ASN][1000 genomes]
rs1367997	0.91[ASN][1000 genomes]
rs1368000	0.87[ASN][1000 genomes]
rs1432087	0.95[ASN][1000 genomes]
rs1469611	0.91[ASN][1000 genomes]
rs1469612	0.91[ASN][1000 genomes]
rs1469614	0.91[ASN][1000 genomes]
rs1560562	0.93[ASN][1000 genomes]
rs1560563	0.89[ASN][1000 genomes]
rs1560564	0.89[ASN][1000 genomes]
rs1560565	0.91[ASN][1000 genomes]
rs1560566	0.91[ASN][1000 genomes]
rs17056275	0.87[ASN][1000 genomes]
rs1864779	0.91[ASN][1000 genomes]
rs1991720	0.95[ASN][1000 genomes]
rs2163615	0.95[ASN][1000 genomes]
rs2217564	0.87[ASN][1000 genomes]
rs4422388	0.89[ASN][1000 genomes]
rs61562612	0.91[ASN][1000 genomes]
rs62344268	0.85[ASN][1000 genomes]
rs62344305	0.91[ASN][1000 genomes]
rs62344306	0.91[ASN][1000 genomes]
rs62344307	0.89[ASN][1000 genomes]
rs62344310	0.91[ASN][1000 genomes]
rs62344312	0.89[ASN][1000 genomes]
rs62344315	0.91[ASN][1000 genomes]
rs72700828	0.91[ASN][1000 genomes]
rs7442140	0.95[ASN][1000 genomes]
rs7675507	0.82[ASN][1000 genomes]
rs7695819	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs919668	0.91[ASN][1000 genomes]
rs930183	0.91[ASN][1000 genomes]
rs989111	0.91[ASN][1000 genomes]
rs989113	0.91[ASN][1000 genomes]
rs991614	0.89[ASN][1000 genomes]
rs991615	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv881345	chr4:171673765-172228547	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
2	nsv881415	chr4:171694739-171842726	Active TSS ZNF genes & repeats Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv881334	chr4:171713039-171842726	Weak transcription Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171793600-171809200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:171807000-171808000	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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